RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 PGBD2Q6P3X8 592 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 LRRC55Q6ZSA7 311 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 ITIH5Q86UX2 942 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 STX12Q86Y82 276 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 ARL10Q8N8L6 244 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 ATL1Q8WXF7 558 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 PRMT6Q96LA8 375 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-201ENST00000312413 CITED4Q96RK1 184 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 HOPXQ9BPY8 73 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-201ENST00000312413 MECRQ9BV79 373 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 NOL11Q9H8H0 719 aaKnown RBP13.77□□□□□ -0.21
CLCN6-201ENST00000312413 GPC6Q9Y625 555 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-201ENST00000312413 PTPRUQ92729 1446 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 CHURC1-FNTBB4DL54 471 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 KPNA6O60684 536 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 BMP7P18075 431 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 INSCQ1MX18 579 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 CRTC3Q6UUV7 619 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 CD101Q93033 1021 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 ZBTB45Q96K62 511 aaPredicted RBP13.77□□□□□ -0.21
CLCN6-201ENST00000312413 PNPOQ9NVS9 261 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 MCUBQ9NWR8 336 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 AK9Q5TCS8 1911 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 BBIP1A8MTZ0 92 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 PIAS1O75925 651 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 USP17L7P0C7H9 530 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 TSPAN8P19075 237 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 EPORP19235 508 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 POLR2LP62875 67 aaKnown RBP13.77□□□□□ -0.21
CLCN6-201ENST00000312413 ACOX1Q15067 660 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 SAMD7Q7Z3H4 446 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 ADGRA1Q86SQ6 560 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 ZFP28Q8NHY6 868 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 SNRNP25Q9BV90 132 aaKnown RBP13.77□□□□□ -0.21
CLCN6-201ENST00000312413 RAB26Q9ULW5 256 aa13.77□□□□□ -0.21
CLCN6-201ENST00000312413 AGLP35573 1532 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 hCG_1818297A0A087WSY0 165 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 TM7SF2O76062 418 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 OTCP00480 354 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 HNRNPLP14866 589 aaKnown RBP eCLIP13.76□□□□□ -0.214e-10■■■□□ 15.1
CLCN6-201ENST00000312413 OMPP47874 163 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 OLFML2AQ68BL7 652 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 TXNDC11Q6PKC3 985 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 SLC47A1Q96FL8 570 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 ACP6Q9NPH0 428 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 IL17RBQ9NRM6 502 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 SETD4Q9NVD3 440 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 USP20Q9Y2K6 914 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 FAM240BA0A1B0GVZ2 78 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 FAM92AA1XBS5 289 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 KPNA5O15131 536 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 TIPRLO75663 272 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 BPGMP07738 259 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 LYNP07948 512 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 PANX1Q96RD7 426 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 SLC17A7Q9P2U7 560 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 GNPTGQ9UJJ9 305 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 QRICH2Q9H0J4 1663 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 EME2A4GXA9 379 aaPredicted RBP13.76□□□□□ -0.21
CLCN6-201ENST00000312413 EML1O00423 815 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 NRP2O60462 931 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 RTN3O95197 1032 aaPredicted RBP13.76□□□□□ -0.21
CLCN6-201ENST00000312413 ALDH2P05091 517 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 FOSL2P15408 326 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 HNRNPH3P31942 346 aaKnown RBP13.76□□□□□ -0.21
CLCN6-201ENST00000312413 HSPA14Q0VDF9 509 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 USP4Q13107 963 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 CCDC157Q569K6 752 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 STYK1Q6J9G0 422 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 BHLHB9Q6PI77 547 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 NPAS2Q99743 824 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 STOML2Q9UJZ1 356 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 POMCP01189 267 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 CKBP12277 381 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 SP100P23497 879 aaPredicted RBP13.76□□□□□ -0.21
CLCN6-201ENST00000312413 CD86P42081 329 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 TTPAP49638 278 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 SKP1P63208 163 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 BNIP1Q12981 228 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 BLMHQ13867 455 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 SCIMPQ6UWF3 145 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 RNF44Q7L0R7 432 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 RAB43Q86YS6 212 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 CEMIPQ8WUJ3 1361 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 ZNF670Q9BS34 389 aa13.76□□□□□ -0.21
CLCN6-201ENST00000312413 GNEQ9Y223 722 aaKnown RBP13.76□□□□□ -0.21
CLCN6-201ENST00000312413 A8MUI8 341 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 TPD52L2O43399 206 aaKnown RBP13.75□□□□□ -0.21
CLCN6-201ENST00000312413 HIST1H2ABP04908 130 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 CYP4B1P13584 511 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 RAB27AP51159 221 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PTCHD4Q6ZW05 846 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 HIST3H2AQ7L7L0 130 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 MEIOBQ8N635 442 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 KLHL23Q8NBE8 558 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PIK3C3Q8NEB9 887 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 NAT14Q8WUY8 206 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 HIST1H2ACQ93077 130 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 PPP1R14BQ96C90 147 aa13.75□□□□□ -0.21
CLCN6-201ENST00000312413 NEK6Q9HC98 313 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms