RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 MROH9Q5TGP6 573 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 FOXR1Q6PIV2 292 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 SPOCD1Q6ZMY3 1216 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 CMTR2Q8IYT2 770 aaKnown RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 DEFB106AQ8N104 65 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 TMEM132CQ8N3T6 1108 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PABPC3Q9H361 631 aaKnown RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 DUSP12Q9UNI6 340 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ZFP37Q9Y6Q3 630 aaPredicted RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ADGRA3Q8IWK6 1321 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 F8VP50 259 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ENDOD1O94919 500 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 RGS1Q08116 209 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PTGES3Q15185 160 aaKnown RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 SEZ6Q53EL9 994 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 POTEHQ6S545 545 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 TRPV3Q8NET8 790 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 RP9Q8TA86 221 aaKnown RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PHOSPHO2Q8TCD6 241 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 EDEM1Q92611 657 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 IRF7Q92985 503 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ZNF514Q96K75 400 aaPredicted RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 HAPLN3Q96S86 360 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 RSPH9Q9H1X1 276 aaPredicted RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 CORO1CQ9ULV4 474 aaPredicted RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 HEBP2Q9Y5Z4 205 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 A0A0U1RQF3 1178 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 SKAP2O75563 359 aaPredicted RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PIGRP01833 764 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ANXA6P08133 673 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 HNRNPA1P09651 372 aaKnown RBP eCLIP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 IGFALSP35858 605 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 RAP1GAPP47736 663 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 HK2P52789 917 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 OTUD4Q01804 1114 aaKnown RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 KIAA0408Q6ZU52 694 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 EID3Q8N140 333 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 MIER2Q8N344 545 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 CATSPERZQ9NTU4 200 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 ATAD3AQ9NVI7 634 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 PCDHGC3Q9UN70 934 aa8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 MRPS33Q9Y291 106 aaKnown RBP8.39□□□□□ -1.07
PCDHB1-201ENST00000306549 A0A0A0MRY4 1105 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 E5RJQ4 531 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 SNPHO15079 494 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 CBX5P45973 191 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 CD151P48509 253 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 CERS6Q6ZMG9 384 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 GPR141Q7Z602 305 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 SMYD1Q8NB12 490 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 UXS1Q8NBZ7 420 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ACTL9Q8TC94 416 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 NEK7Q8TDX7 302 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 SPATA13Q96N96 652 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 APOL4Q9BPW4 351 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 NXF3Q9H4D5 531 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 DNAJC11Q9NVH1 559 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 OR10H1Q9Y4A9 318 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 TAF6LQ9Y6J9 622 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 VSTM5A8MXK1 200 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 DGKIO75912 1065 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 NFKB1P19838 968 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ATP6V1B2P21281 511 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 FAM98BQ52LJ0 330 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 GALNT18Q6P9A2 607 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 TMEM26Q6ZUK4 368 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 EXOC3L1Q86VI1 746 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 OR8H2Q8N162 312 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 NSL1Q96IY1 281 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 SUSD3Q96L08 255 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 MAGEH1Q9H213 219 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 PDZD7Q9H5P4 517 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 FBRSQ9HAH7 460 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 GPAMQ9HCL2 828 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 IL1RAPL1Q9NZN1 696 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ACOT9Q9Y305 439 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ASXL3Q9C0F0 2248 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 A0A087X1B8 175 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 A0A1W2PQ45 241 aaPredicted RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 A0A1W2PQY0 241 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 PDE9AO76083 593 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 IL1BP01584 269 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 SUZ12Q15022 739 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 CELF5Q8N6W0 485 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 DUS2Q9NX74 493 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 FER1L6Q2WGJ9 1857 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 MYL12BO14950 172 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 CD3EAPO15446 510 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 CSDE1O75534 798 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 HSMCR30P0CW71 290 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 GPD2P43304 727 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ITGA8P53708 1063 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 TRAF2Q12933 501 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 BOP1Q14137 746 aaKnown RBP8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ACAP2Q15057 778 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 PRR23CQ6ZRP0 262 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 PIGZQ86VD9 579 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 TRAPPC5Q8IUR0 188 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 KREMEN2Q8NCW0 462 aa8.38□□□□□ -1.07
PCDHB1-201ENST00000306549 ZSWIM2Q8NEG5 633 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms