RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 GLOD4Q9HC38 313 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 SFMBT1Q9UHJ3 866 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 TMCO1Q9UM00 188 aa13.38□□□□□ -0.27
DDX54-201ENST00000306014 TAF1P21675 1872 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 TMEM247A6NEH6 219 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 AZIN1O14977 448 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 FGF10O15520 208 aaPredicted RBP13.37□□□□□ -0.27
DDX54-201ENST00000306014 SLC11A2P49281 568 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 BEX3Q00994 111 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 ARMC3Q5W041 872 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 TLK2Q86UE8 772 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 TMEM86AQ8N2M4 240 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 ATG16L2Q8NAA4 619 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 GBA3Q9H227 469 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 PNPLA8Q9NP80 782 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 IRS2Q9Y4H2 1338 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 NEMP2A6NFY4 417 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 MT-ND1P03886 318 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 TTKP33981 857 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 GSSP48637 474 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 TRIM25Q14258 630 aaKnown RBP13.37□□□□□ -0.27
DDX54-201ENST00000306014 PLCL1Q15111 1095 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 NCBP2-AS2Q69YL0 99 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 FCRL2Q96LA5 508 aaPredicted RBP13.37□□□□□ -0.27
DDX54-201ENST00000306014 SH3GL1Q99961 368 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 C1orf21Q9H246 121 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 ABCC13Q9NSE7 274 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 CATSPERZQ9NTU4 200 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 SIX4Q9UIU6 781 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 SLC13A4Q9UKG4 626 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 CCL22O00626 93 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 LRIG2O94898 1065 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 ZNF132P52740 706 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 FCGRTP55899 365 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 DGCR6Q14129 220 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 ARHGEF7Q14155 803 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 VEPH1Q14D04 833 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 PRAMEF19Q5SWL8 479 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 MBLAC2Q68D91 279 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 GLT6D1Q7Z4J2 308 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 GIPC3Q8TF64 312 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 LPPQ93052 612 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 COQ10BQ9H8M1 238 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 ACTR8Q9H981 624 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 ZNF556Q9HAH1 456 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 PARVBQ9HBI1 364 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 ZNF112Q9UJU3 913 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 KCNH4Q9UQ05 1017 aa13.37□□□□□ -0.27
DDX54-201ENST00000306014 CFAP99D6REC4 459 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 COL6A2P12110 1019 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 TPP2P29144 1249 aaPredicted RBP13.36□□□□□ -0.27
DDX54-201ENST00000306014 EIF2B2P49770 351 aaKnown RBP13.36□□□□□ -0.27
DDX54-201ENST00000306014 TAS2R39P59534 338 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 DPYSQ14117 519 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 LPIN1Q14693 890 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 TRIM60Q495X7 471 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 CTXN3Q4LDR2 81 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 HS6ST3Q8IZP7 471 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 CBR4Q8N4T8 237 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 MYLPFQ96A32 169 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 TMPRSS4Q9NRS4 437 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 PTTG2Q9NZH5 202 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 CYTH4Q9UIA0 394 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 MFHAS1Q9Y4C4 1052 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 NAV1Q8NEY1 1877 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 NRCAMQ92823 1304 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 PDE4DIPQ5VU43 2346 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 EGFRP00533 1210 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 SMIM10L2AP0DMW4 78 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 SMIM10L2BP0DMW5 78 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 CYP2C18P33260 490 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 CCDC85BQ15834 202 aaPredicted RBP13.36□□□□□ -0.27
DDX54-201ENST00000306014 VPS26BQ4G0F5 336 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 TIGD2Q4W5G0 525 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 FAM45BPQ6NSW5 357 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 EID3Q8N140 333 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 CDYL2Q8N8U2 506 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 FAM45AQ8TCE6 357 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 ZFP42Q96MM3 310 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 SEMA3CQ99985 751 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 BCO2Q9BYV7 579 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 UNC93B1Q9H1C4 597 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 NMRK2Q9NPI5 230 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 FZD10Q9ULW2 581 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 UBR2Q8IWV8 1755 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 VPS4BO75351 444 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 CDH5P33151 784 aaPredicted RBP13.36□□□□□ -0.27
DDX54-201ENST00000306014 SNX17Q15036 470 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 NFE2Q16621 373 aaPredicted RBP13.36□□□□□ -0.27
DDX54-201ENST00000306014 NADK2Q4G0N4 442 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 FBXO48Q5FWF7 155 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 B3GNT9Q6UX72 402 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 GPSM1Q86YR5 675 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 CCDC103Q8IW40 242 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 RORBQ92753 470 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 MAGED4Q96JG8 741 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 POLR1EQ9GZS1 481 aaKnown RBP13.36□□□□□ -0.27
DDX54-201ENST00000306014 XYLT2Q9H1B5 865 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 USP29Q9HBJ7 922 aa13.36□□□□□ -0.27
DDX54-201ENST00000306014 FADS3Q9Y5Q0 445 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms