RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 KCTD4Q8WVF5 259 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 CASP10Q92851 521 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SERPINI1Q99574 410 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 FSD1LQ9BXM9 530 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 TREX1Q9NSU2 369 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 PRPF19Q9UMS4 504 aaKnown RBP14.33□□□□□ -0.12
RAB40A-201ENST00000304236 SSX2IPQ9Y2D8 614 aa14.33□□□□□ -0.12
RAB40A-201ENST00000304236 GOLGA8QA0A0J9YX86 632 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 LOC100653049A0A140TA62 436 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 GOLGA8OA6NCC3 632 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 KCNU1A8MYU2 1149 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 GOLGA8NF8WBI6 632 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 TK2O00142 265 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 INPPL1O15357 1258 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 ZBTB14O43829 449 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 MGEA5O60502 916 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 KRT34O76011 436 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 HLA-DQB2P05538 268 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 F7P08709 466 aaPredicted RBP14.32□□□□□ -0.12
RAB40A-201ENST00000304236 TFEBP19484 476 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 MPSTP25325 297 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 EPHB1P54762 984 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 XIAPP98170 497 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 POU4F1Q01851 419 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 TBL3Q12788 808 aaKnown RBP14.32□□□□□ -0.12
RAB40A-201ENST00000304236 HERC3Q15034 1050 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 ARL13AQ5H913 290 aaPredicted RBP14.32□□□□□ -0.12
RAB40A-201ENST00000304236 RANBP10Q6VN20 620 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 FRMD7Q6ZUT3 714 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 CENPLQ8N0S6 344 aaPredicted RBP14.32□□□□□ -0.12
RAB40A-201ENST00000304236 OR52B2Q96RD2 323 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 TMEM209Q96SK2 561 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 UHRF1Q96T88 793 aaPredicted RBP14.32□□□□□ -0.12
RAB40A-201ENST00000304236 ECSITQ9BQ95 431 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 MRPL57Q9BQC6 102 aaKnown RBP14.32□□□□□ -0.12
RAB40A-201ENST00000304236 SLC25A51Q9H1U9 297 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 MRPL46Q9H2W6 279 aaKnown RBP14.32□□□□□ -0.12
RAB40A-201ENST00000304236 MRGBPQ9NV56 204 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 CDYLQ9Y232 598 aa14.32□□□□□ -0.12
RAB40A-201ENST00000304236 E9PAM4 449 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 PIK3R1P27986 724 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 NAGLUP54802 743 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 SLC12A2P55011 1212 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 MTTPP55157 894 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 MLLT6P55198 1093 aaPredicted RBP14.31□□□□□ -0.12
RAB40A-201ENST00000304236 DNAJB13P59910 316 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 TFF2Q03403 129 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 ILF2Q12905 390 aaKnown RBP14.31□□□□□ -0.12
RAB40A-201ENST00000304236 FAM26DQ5JW98 314 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 SCD5Q86SK9 330 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 DHDDSQ86SQ9 333 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 ARHGAP18Q8N392 663 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 GDPD5Q8WTR4 605 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 LENG8Q96PV6 779 aaPredicted RBP14.31□□□□□ -0.12
RAB40A-201ENST00000304236 RANBP9Q96S59 729 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 ADAM2Q99965 735 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 CYP4F11Q9HBI6 524 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 ARNT2Q9HBZ2 717 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 MAN1C1Q9NR34 630 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 SFMBT1Q9UHJ3 866 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 BCAP29Q9UHQ4 241 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 IPO11Q9UI26 975 aaKnown RBP14.31□□□□□ -0.12
RAB40A-201ENST00000304236 PPM1HQ9ULR3 514 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 POMPQ9Y244 141 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 HEATR9A2RTY3 570 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 DPPA5A6NC42 116 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 GRID2O43424 1007 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 DLX3O60479 287 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 PMPCBO75439 489 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 CHRNGP07510 517 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 AVPR1AP37288 418 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 PAPOLAP51003 745 aaKnown RBP14.31□□□□□ -0.12
RAB40A-201ENST00000304236 RENBPP51606 427 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 NDST2P52849 883 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 HTRA4P83105 476 aaPredicted RBP14.31□□□□□ -0.12
RAB40A-201ENST00000304236 MPP1Q00013 466 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 YWHAHQ04917 246 aaPredicted RBP14.31□□□□□ -0.12
RAB40A-201ENST00000304236 CTBP1Q13363 440 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 CCNIQ14094 377 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 HNRNPDQ14103 355 aaKnown RBP14.31□□□□□ -0.12
RAB40A-201ENST00000304236 LSM12Q3MHD2 195 aaKnown RBP14.31□□□□□ -0.12
RAB40A-201ENST00000304236 MSANTD2Q6P1R3 559 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 IZUMO2Q6UXV1 221 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 MON1AQ86VX9 555 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 DENND6AQ8IWF6 608 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 DCP1BQ8IZD4 617 aaKnown RBP14.31□□□□□ -0.12
RAB40A-201ENST00000304236 SLC25A41Q8N5S1 370 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 HLA-CQ95604 372 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 PPP2R3CQ969Q6 453 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 CCDC126Q96EE4 140 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 ELMO2Q96JJ3 720 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 MRGPRX2Q96LB1 330 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 GPR78Q96P69 363 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 XPR1Q9UBH6 696 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 INPP5FQ9Y2H2 1132 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 HS3ST4Q9Y661 456 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 SQORQ9Y6N5 450 aa14.31□□□□□ -0.12
RAB40A-201ENST00000304236 PRRC2BQ5JSZ5 2229 aaKnown RBP14.31□□□□□ -0.12
RAB40A-201ENST00000304236 PTPRSQ13332 1948 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms