RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 HADHAP40939 763 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 MAPK8P45983 427 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 WDR4P57081 412 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 AP1S1P61966 158 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 LVRNQ6Q4G3 990 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 SRLQ86TD4 932 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 ADGRG2Q8IZP9 1017 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 VN1R2Q8NFZ6 395 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 PTPRN2Q92932 1015 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 ATP2A3Q93084 1043 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 LMLNQ96KR4 655 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 LINC00597Q9H2U6 94 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 RABEP2Q9H5N1 569 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 MARK1Q9P0L2 795 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 PCDHGC4Q9Y5F7 938 aa15.83■□□□□ 0.12
HERPUD1-201ENST00000300302 GOLGA8TH3BQL2 631 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 LDB2O43679 373 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 SIN3BO75182 1162 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 CRTAMO95727 393 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 FSHRP23945 695 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 NEK3P51956 506 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 DMC1Q14565 340 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 LY6G5CQ5SRR4 150 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 CPLX4Q7Z7G2 160 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 NDUFAF2Q8N183 169 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 ZNF317Q96PQ6 595 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 SRPK1Q96SB4 655 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 SLC2A11Q9BYW1 496 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 FAM107BQ9H098 131 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 IGFLR1Q9H665 355 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 GGA2Q9UJY4 613 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 INTS6Q9UL03 887 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 RIMKLBQ9ULI2 386 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 WNT6Q9Y6F9 365 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 NUP210Q8TEM1 1887 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 CDH23Q9H251 3354 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 TNRC18O15417 2968 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 K7ERQ8 282 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 SLC7A4O43246 635 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 ALDOAP04075 364 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 VIMP08670 466 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 ARNTP27540 789 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 CSNK1DP48730 415 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 SERPINB8P50452 374 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 PRAMEP78395 509 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 SULT2A1Q06520 285 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 RARS2Q5T160 578 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 FSTL4Q6MZW2 842 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 NEPROQ6NW34 567 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 LMNTD2Q8IXW0 634 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 SLC13A1Q9BZW2 595 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 NSRP1Q9H0G5 558 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 PCMTD2Q9NV79 361 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 SLC25A13Q9UJS0 675 aa15.82■□□□□ 0.12
HERPUD1-201ENST00000300302 ERICH4A6NGS2 130 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 TPP1O14773 563 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 IGSF6O95976 241 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 PABPC1P11940 636 aaKnown RBP15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 TYK2P29597 1187 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 CRHR1P34998 444 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 FUT11Q495W5 492 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 ATXN7L2Q5T6C5 722 aaPredicted RBP15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 ZNF470Q6ECI4 717 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 KIAA0408Q6ZU52 694 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 LPCAT1Q8NF37 534 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 OR13J1Q8NGT2 312 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 STYXQ8WUJ0 223 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 PDCD6IPQ8WUM4 868 aaKnown RBP15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 SPOCK2Q92563 424 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 CABS1Q96KC9 395 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 NSMCE3Q96MG7 304 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 TM6SF2Q9BZW4 377 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 PRO3102Q9H379 93 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 RHOJQ9H4E5 214 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 DUS2Q9NX74 493 aaKnown RBP15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 HS3ST2Q9Y278 367 aa15.81■□□□□ 0.12
HERPUD1-201ENST00000300302 TCP11X1B4DZS4 312 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ANKRD66B4E2M5 251 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 SMAD6O43541 496 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 PRLP01236 227 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 RGS19P49795 217 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ACVR1Q04771 509 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 TRAF2Q12933 501 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 PDK4Q16654 411 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ZSCAN26Q16670 478 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 TMEM184AQ6ZMB5 413 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 GLT6D1Q7Z4J2 308 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 GPR149Q86SP6 731 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ZC3HC1Q86WB0 502 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 NPAS3Q8IXF0 933 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 DCLK2Q8N568 766 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 C2CD4AQ8NCU7 369 aaPredicted RBP15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 OR6P1Q8NGX9 317 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ZNF473Q8WTR7 871 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 OSCP1Q8WVF1 389 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 SMARCD2Q92925 531 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ISL2Q96A47 359 aa15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ISG20Q96AZ6 181 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-201ENST00000300302 ATXN7L3BQ96GX2 97 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms