RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 DDHD1Q8NEL9 900 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 ZNF555Q8NEP9 628 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 ELMO1Q92556 727 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 RTKNQ9BST9 563 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 HGH1Q9BTY7 390 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 ALG2Q9H553 416 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 NMRK2Q9NPI5 230 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 VTI1BQ9UEU0 232 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 ST3GAL5Q9UNP4 418 aa13.4□□□□□ -0.26
CASC4-201ENST00000299957 RPL26L1Q9UNX3 145 aaKnown RBP13.4□□□□□ -0.26
CASC4-201ENST00000299957 TRIM38O00635 465 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 ADCY6O43306 1168 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 HS6ST1O60243 411 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 MTHFD1P11586 935 aaKnown RBP13.39□□□□□ -0.27
CASC4-201ENST00000299957 CLK1P49759 484 aaKnown RBP13.39□□□□□ -0.27
CASC4-201ENST00000299957 RAD51Q06609 339 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 FRG1Q14331 258 aaKnown RBP13.39□□□□□ -0.27
CASC4-201ENST00000299957 CTXN3Q4LDR2 81 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 TRNP1Q6NT89 227 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 PIWIL4Q7Z3Z4 852 aaKnown RBP13.39□□□□□ -0.27
CASC4-201ENST00000299957 TAC4Q86UU9 113 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 BPIFB6Q8NFQ5 453 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 APBB2Q92870 758 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.39□□□□□ -0.271e-14■■■■□ 26
CASC4-201ENST00000299957 NDUFA13Q9P0J0 144 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 SIRPGQ9P1W8 387 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 CIDEBQ9UHD4 219 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 VWA7Q9Y334 891 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 CCDC88AQ3V6T2 1871 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 ARID1BQ8NFD5 2236 aaPredicted RBP13.39□□□□□ -0.27
CASC4-201ENST00000299957 A0A088AWK7 358 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 E7ENX8 843 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 TBC1D4O60343 1298 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 FBXO21O94952 628 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 LDLRP01130 860 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 MYL4P12829 197 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 DNAJB2P25686 324 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 PSMB9P28065 219 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 WEE1P30291 646 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 CD52P31358 61 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 ZBTB17Q13105 803 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 SNX17Q15036 470 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 DPYSL2Q16555 572 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 ANKS6Q68DC2 871 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 ZFP1Q6P2D0 407 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 AAGABQ6PD74 315 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 STRADAQ7RTN6 431 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 OR10Q1Q8NGQ4 319 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 SLC35F5Q8WV83 523 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 A0A0J9YYE9 177 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 MEIS3P2A8K0S8 358 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 TMCC1O94876 653 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 PIGRP01833 764 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 FESP07332 822 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 HSMCR30P0CW71 290 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 TMED10P49755 219 aaKnown RBP13.39□□□□□ -0.27
CASC4-201ENST00000299957 DCTN2Q13561 401 aaKnown RBP13.39□□□□□ -0.27
CASC4-201ENST00000299957 AP5B1Q2VPB7 878 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 SPESP1Q6UW49 350 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 LGI2Q8N0V4 545 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 KCTD3Q9Y597 815 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 PTGDR2Q9Y5Y4 395 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 DGKBQ9Y6T7 804 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 A0A1W2PQ67 120 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 CCDC154A6NI56 674 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 AP3B1O00203 1094 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 SERPINF2P08697 491 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 CYP4B1P13584 511 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 EPHX2P34913 555 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 SLC1A2P43004 574 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 HSPA13P48723 471 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 PSEN2P49810 448 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 MADCAM1Q13477 382 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 TCEAL1Q15170 157 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 ACVR1CQ8NER5 493 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 DQX1Q8TE96 717 aaKnown RBP13.39□□□□□ -0.27
CASC4-201ENST00000299957 CANT1Q8WVQ1 401 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 SLC45A3Q96JT2 553 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 GLOD4Q9HC38 313 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 STYXL1Q9Y6J8 313 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 COMMD3-BMI1R4GMX3 469 aa13.39□□□□□ -0.27
CASC4-201ENST00000299957 ASCC3Q8N3C0 2202 aaKnown RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 DHRS12A0PJE2 317 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 UBXN8O00124 270 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 LIN7AO14910 233 aaPredicted RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 DLX3O60479 287 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 CPSF4O95639 269 aaKnown RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 RPL10P27635 214 aaKnown RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 POU1F1P28069 291 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 ICAM3P32942 547 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 ETV4P43268 484 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 PSMD7P51665 324 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 TMEM214Q6NUQ4 689 aaKnown RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 PKN3Q6P5Z2 889 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 DTNBP1Q96EV8 351 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 DDX28Q9NUL7 540 aaKnown RBP13.38□□□□□ -0.27
CASC4-201ENST00000299957 STK39Q9UEW8 545 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 NTRK1P04629 796 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 GSNP06396 782 aa13.38□□□□□ -0.27
CASC4-201ENST00000299957 ABCB1P08183 1280 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms