RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 FBXO6Q9NRD1 293 aaPredicted RBP16.97■□□□□ 0.31
CPSF4-201ENST00000292476 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.97■□□□□ 0.31
CPSF4-201ENST00000292476 CLDND1Q9NY35 253 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 ARHGAP26Q9UNA1 814 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 MTCL1Q9Y4B5 1905 aaKnown RBP16.97■□□□□ 0.31
CPSF4-201ENST00000292476 DOCK4Q8N1I0 1966 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 LINC01565O15544 149 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 POLBP06746 335 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 GM2AP17900 193 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 NFKB1P19838 968 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 GRIA1P42261 906 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 GNA12Q03113 381 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 ARMC3Q5W041 872 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 Q6ZNB5 142 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 KLHDC8BQ8IXV7 354 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 CPXM2Q8N436 756 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 CDCA3Q99618 268 aaPredicted RBP16.97■□□□□ 0.31
CPSF4-201ENST00000292476 CPNE1Q99829 537 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 PRKD2Q9BZL6 878 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 TASP1Q9H6P5 420 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 UBE2ZQ9H832 354 aaPredicted RBP16.97■□□□□ 0.31
CPSF4-201ENST00000292476 BFARQ9NZS9 450 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 TBC1D30Q9Y2I9 924 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 LRRC42Q9Y546 428 aa16.97■□□□□ 0.31
CPSF4-201ENST00000292476 ANAPC1Q9H1A4 1944 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 FAM237BA0A1B0GVD1 139 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 MAGEB16A2A368 324 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 MAGEC1O60732 1142 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 RHOCP08134 193 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 KCNA5P22460 613 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 GRK2P25098 689 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 CD68P34810 354 aaPredicted RBP16.96■□□□□ 0.31
CPSF4-201ENST00000292476 NPY2RP49146 381 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 RAP1GDS1P52306 607 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 CLNS1AP54105 237 aaKnown RBP16.96■□□□□ 0.31
CPSF4-201ENST00000292476 OXCT1P55809 520 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 RFTN1Q14699 578 aaPredicted RBP16.96■□□□□ 0.31
CPSF4-201ENST00000292476 MPP7Q5T2T1 576 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 GRTP1Q5TC63 336 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 KCTD11Q693B1 232 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 CASC4Q6P4E1 433 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 ARHGAP36Q6ZRI8 547 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 CFAP52Q8N1V2 620 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 TEX26Q8N6G2 289 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 MCUR1Q96AQ8 359 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 TMA16Q96EY4 203 aaKnown RBP16.96■□□□□ 0.31
CPSF4-201ENST00000292476 ZNF570Q96NI8 536 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 SLC22A12Q96S37 553 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 MECRQ9BV79 373 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 NMUR2Q9GZQ4 415 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 VPS45Q9NRW7 570 aa16.96■□□□□ 0.31
CPSF4-201ENST00000292476 E2F8A0AVK6 867 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 PRAMEF11O60813 436 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 RHOP08100 348 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 SERPINA6P08185 405 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 EPCAMP16422 314 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 MGAT1P26572 445 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 GP5P40197 560 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 MAGEA12P43365 314 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 MPP3Q13368 585 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 GPR158Q5T848 1215 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 TMPRSS6Q8IU80 811 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 ARID3BQ8IVW6 561 aaPredicted RBP16.95■□□□□ 0.3
CPSF4-201ENST00000292476 CNTD1Q8N815 330 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 PABPC5Q96DU9 382 aaKnown RBP16.95■□□□□ 0.3
CPSF4-201ENST00000292476 PRICKLE1Q96MT3 831 aaPredicted RBP16.95■□□□□ 0.3
CPSF4-201ENST00000292476 SLC25A51Q9H1U9 297 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 TAS2R1Q9NYW7 299 aa16.95■□□□□ 0.3
CPSF4-201ENST00000292476 NKX1-2Q9UD57 310 aaPredicted RBP16.95■□□□□ 0.3
CPSF4-201ENST00000292476 H3BQ06 376 aaPredicted RBP16.94■□□□□ 0.3
CPSF4-201ENST00000292476 PLIN3O60664 434 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 ALDOAP04075 364 aaKnown RBP16.94■□□□□ 0.3
CPSF4-201ENST00000292476 ITGA2BP08514 1039 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 RPS24P62847 133 aaKnown RBP16.94■□□□□ 0.3
CPSF4-201ENST00000292476 DLX2Q07687 328 aaPredicted RBP16.94■□□□□ 0.3
CPSF4-201ENST00000292476 CDH17Q12864 832 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 DNAL1Q4LDG9 190 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 MPPE1Q53F39 396 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 MBLAC2Q68D91 279 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 IL31Q6EBC2 164 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 CIR1Q86X95 450 aaPredicted RBP16.94■□□□□ 0.3
CPSF4-201ENST00000292476 WDR75Q8IWA0 830 aaKnown RBP16.94■□□□□ 0.3
CPSF4-201ENST00000292476 CMTM8Q8IZV2 173 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 TEX9Q8N6V9 391 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 DNAAF3Q8N9W5 541 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 SHKBP1Q8TBC3 707 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 USP33Q8TEY7 942 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 SLC46A2Q9BY10 475 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 CFAP97Q9P2B7 532 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 DNMT3BQ9UBC3 853 aaKnown RBP16.94■□□□□ 0.3
CPSF4-201ENST00000292476 STOML1Q9UBI4 398 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 TAGLN3Q9UI15 199 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 NUP205Q92621 2012 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.94■□□□□ 0.3
CPSF4-201ENST00000292476 H0Y626 953 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 KDELR3O43731 214 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 GREM1O60565 184 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 RFPL2O75678 378 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 PEX11BO96011 259 aa16.94■□□□□ 0.3
CPSF4-201ENST00000292476 GSRP00390 522 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms