RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 MIPP30301 263 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 IQCB1Q15051 598 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 ERMARDQ5T6L9 678 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 ZCCHC8Q6NZY4 707 aaKnown RBP25.48■■□□□ 1.67
U2AF1-201ENST00000291552 ARHGAP36Q6ZRI8 547 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 RFX8Q6ZV50 586 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 LMX1AQ8TE12 382 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 NCAPGQ9BPX3 1015 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 LRRC61Q9BV99 259 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 USP29Q9HBJ7 922 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 PCDH12Q9NPG4 1184 aa25.48■■□□□ 1.67
U2AF1-201ENST00000291552 CNOT8Q9UFF9 292 aaKnown RBP25.48■■□□□ 1.67
U2AF1-201ENST00000291552 LRCH4O75427 683 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 PRKCGP05129 697 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 GP1BAP07359 652 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 GZMAP12544 262 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 DESP17661 470 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 ERCC2P18074 760 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 EIF2S3P41091 472 aaKnown RBP25.47■■□□□ 1.67
U2AF1-201ENST00000291552 SOWAHCQ53LP3 525 aaPredicted RBP25.47■■□□□ 1.67
U2AF1-201ENST00000291552 CAVIN1Q6NZI2 390 aaKnown RBP25.47■■□□□ 1.67
U2AF1-201ENST00000291552 GUSBP11Q6P575 273 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 MACC1Q6ZN28 852 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 CAMK1DQ8IU85 385 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 TP53INP2Q8IXH6 220 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 PHACTR4Q8IZ21 702 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 TSEN2Q8NCE0 465 aaKnown RBP25.47■■□□□ 1.67
U2AF1-201ENST00000291552 IFI44Q8TCB0 444 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 FNIP1Q8TF40 1166 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 ZNF653Q96CK0 615 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 NSMCE3Q96MG7 304 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 SUV39H2Q9H5I1 410 aa25.47■■□□□ 1.67
U2AF1-201ENST00000291552 APOBEC3BQ9UH17 382 aaKnown RBP25.47■■□□□ 1.67
U2AF1-201ENST00000291552 SMTNL1A8MU46 457 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 EIF3CLB5ME19 914 aaKnown RBP25.46■■□□□ 1.67
U2AF1-201ENST00000291552 SKILP12757 684 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 C6P13671 934 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 MMP12P39900 470 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 ZNF165P49910 485 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 SUOXP51687 545 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 THOP1P52888 689 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 YPEL5P62699 121 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 ELP6Q0PNE2 266 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 C1orf61Q13536 156 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 CDKN3Q16667 212 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 UGP2Q16851 508 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 WSCD2Q2TBF2 565 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 NYAP1Q6ZVC0 841 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 SNIP1Q8TAD8 396 aaKnown RBP25.46■■□□□ 1.67
U2AF1-201ENST00000291552 HCAR2Q8TDS4 363 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 BBC3Q96PG8 261 aaPredicted RBP25.46■■□□□ 1.67
U2AF1-201ENST00000291552 EIF3CQ99613 913 aaKnown RBP25.46■■□□□ 1.67
U2AF1-201ENST00000291552 CLPBQ9H078 707 aa25.46■■□□□ 1.67
U2AF1-201ENST00000291552 ARHGAP42A6NI28 874 aa25.45■■□□□ 1.66
U2AF1-201ENST00000291552 MUSKO15146 869 aa25.45■■□□□ 1.66
U2AF1-201ENST00000291552 CELA2BP08218 269 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-201ENST00000291552 TCF4P15884 667 aa25.45■■□□□ 1.66
U2AF1-201ENST00000291552 EIF4A3P38919 411 aaKnown RBP25.45■■□□□ 1.66
U2AF1-201ENST00000291552 DUSP3P51452 185 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-201ENST00000291552 KLHL30Q0D2K2 578 aa25.45■■□□□ 1.66
U2AF1-201ENST00000291552 DPYSQ14117 519 aa25.45■■□□□ 1.66
U2AF1-201ENST00000291552 PTK2BQ14289 1009 aa25.45■■□□□ 1.66
U2AF1-201ENST00000291552 PRRT3Q5FWE3 981 aa25.45■■□□□ 1.66
U2AF1-201ENST00000291552 PPP6R3Q5H9R7 873 aaPredicted RBP25.45■■□□□ 1.66
U2AF1-201ENST00000291552 BOCQ9BWV1 1114 aa25.45■■□□□ 1.66
U2AF1-201ENST00000291552 C1QTNF7Q9BXJ2 289 aa25.45■■□□□ 1.66
U2AF1-201ENST00000291552 CWC15Q9P013 229 aaKnown RBP25.45■■□□□ 1.66
U2AF1-201ENST00000291552 SPASTQ9UBP0 616 aa25.45■■□□□ 1.66
U2AF1-201ENST00000291552 RIOK3O14730 519 aaKnown RBP25.44■■□□□ 1.66
U2AF1-201ENST00000291552 CASC3O15234 703 aaKnown RBP25.44■■□□□ 1.66
U2AF1-201ENST00000291552 LZTS3O60299 673 aaPredicted RBP25.44■■□□□ 1.66
U2AF1-201ENST00000291552 TGM2P21980 687 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 XPAP23025 273 aaPredicted RBP25.44■■□□□ 1.66
U2AF1-201ENST00000291552 IL1R2P27930 398 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 ABCG1P45844 678 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 CSNK1DP48730 415 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 COL9A2Q14055 689 aaPredicted RBP25.44■■□□□ 1.66
U2AF1-201ENST00000291552 GRM3Q14832 879 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 NR1I3Q14994 352 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 FILIP1LQ4L180 1135 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 SRLQ86TD4 932 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 SLC35F3Q8IY50 421 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 BTN2A2Q8WVV5 523 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 TBATAQ96M53 351 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 ZNF641Q96N77 438 aaPredicted RBP25.44■■□□□ 1.66
U2AF1-201ENST00000291552 TUBGCP5Q96RT8 1024 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 DONSONQ9NYP3 566 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 SALL4Q9UJQ4 1053 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 ATP8A1Q9Y2Q0 1164 aa25.44■■□□□ 1.66
U2AF1-201ENST00000291552 TOR1BO14657 336 aa25.43■■□□□ 1.66
U2AF1-201ENST00000291552 TPP1O14773 563 aa25.43■■□□□ 1.66
U2AF1-201ENST00000291552 PRPSAP2O60256 369 aa25.43■■□□□ 1.66
U2AF1-201ENST00000291552 CSO75390 466 aaKnown RBP25.43■■□□□ 1.66
U2AF1-201ENST00000291552 RNF8O76064 485 aa25.43■■□□□ 1.66
U2AF1-201ENST00000291552 ADKP55263 362 aaKnown RBP25.43■■□□□ 1.66
U2AF1-201ENST00000291552 LRRC14Q15048 493 aa25.43■■□□□ 1.66
U2AF1-201ENST00000291552 TBC1D25Q3MII6 688 aa25.43■■□□□ 1.66
U2AF1-201ENST00000291552 PERM1Q5SV97 790 aa25.43■■□□□ 1.66
U2AF1-201ENST00000291552 KCTD16Q68DU8 428 aa25.43■■□□□ 1.66
U2AF1-201ENST00000291552 BRAT1Q6PJG6 821 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms