RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CFAP58Q5T655 872 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 KIAA1161Q6NSJ0 714 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 SLC13A5Q86YT5 568 aaPredicted RBP27.13■■□□□ 1.93
SSU72-201ENST00000291386 TEKT5Q96M29 485 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 SEMA4GQ9NTN9 838 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 EIF2B4Q9UI10 523 aaKnown RBP27.13■■□□□ 1.93
SSU72-201ENST00000291386 PCDHGC4Q9Y5F7 938 aa27.13■■□□□ 1.93
SSU72-201ENST00000291386 H7C0C1 242 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 KIF5CO60282 957 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 FZD6O60353 706 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 RBP3P10745 1247 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 MSNP26038 577 aaKnown RBP27.12■■□□□ 1.93
SSU72-201ENST00000291386 MAOBP27338 520 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 ATP5OP48047 213 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 EIF3EP60228 445 aaKnown RBP27.12■■□□□ 1.93
SSU72-201ENST00000291386 SPEM2Q0P670 501 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 ELP6Q0PNE2 266 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 TRAF2Q12933 501 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 IHHQ14623 411 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 ZNF569Q5MCW4 686 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 HORMAD1Q86X24 394 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 CDKL3Q8IVW4 592 aaPredicted RBP27.12■■□□□ 1.93
SSU72-201ENST00000291386 FEM1CQ96JP0 617 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 HINFPQ9BQA5 517 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 EBF2Q9HAK2 575 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 PARD6AQ9NPB6 346 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 KCND1Q9NSA2 647 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 SEPT10Q9P0V9 454 aa27.12■■□□□ 1.93
SSU72-201ENST00000291386 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.12■■□□□ 1.931e-16■■□□□ 11.4
SSU72-201ENST00000291386 EP300Q09472 2414 aaPredicted RBP27.12■■□□□ 1.93
SSU72-201ENST00000291386 PI4KAP42356 2102 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 USP27XA6NNY8 438 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 FOXD2O60548 495 aaPredicted RBP27.11■■□□□ 1.93
SSU72-201ENST00000291386 SERPINF2P08697 491 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 GNSP15586 552 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 XPAP23025 273 aaPredicted RBP27.11■■□□□ 1.93
SSU72-201ENST00000291386 RBL1P28749 1068 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 SLC14A2Q15849 920 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 DUOXA1Q1HG43 343 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 TMEM52BQ4KMG9 183 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 TMEM259Q4ZIN3 620 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 SLC23A3Q6PIS1 610 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 PRPF39Q86UA1 669 aaKnown RBP27.11■■□□□ 1.93
SSU72-201ENST00000291386 ALYREFQ86V81 257 aaKnown RBP27.11■■□□□ 1.93
SSU72-201ENST00000291386 SNX19Q92543 992 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 CEP41Q9BYV8 373 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 FRMD8P1Q9BZ68 369 aaPredicted RBP27.11■■□□□ 1.93
SSU72-201ENST00000291386 SLC25A51Q9H1U9 297 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 ZFR2Q9UPR6 939 aaKnown RBP27.11■■□□□ 1.93
SSU72-201ENST00000291386 DMTF1Q9Y222 760 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 TTLL3Q9Y4R7 772 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 RAI2Q9Y5P3 530 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 ATXN2Q99700 1313 aaKnown RBP27.11■■□□□ 1.93
SSU72-201ENST00000291386 PIEZO1Q92508 2521 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 TRPM6Q9BX84 2022 aa27.11■■□□□ 1.93
SSU72-201ENST00000291386 A0A1B0GTW7 788 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 A0A1W2PQU0 124 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 TCRBV7S2A1N4TA0A589 114 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 PRR5-ARHGAP8B1AHC4 643 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 RIOK3O14730 519 aaKnown RBP27.1■■□□□ 1.93
SSU72-201ENST00000291386 PCDH8O95206 1070 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 PGLSO95336 258 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 MMP2P08253 660 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 RPS21P63220 83 aaKnown RBP27.1■■□□□ 1.93
SSU72-201ENST00000291386 SLC35F6Q8N357 371 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 SLC35B2Q8TB61 432 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 TADA1Q96BN2 335 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 IMP4Q96G21 291 aaKnown RBP27.1■■□□□ 1.93
SSU72-201ENST00000291386 AGAP3Q96P47 875 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 FERMT1Q9BQL6 677 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 TDRD1Q9BXT4 1180 aaKnown RBP27.1■■□□□ 1.93
SSU72-201ENST00000291386 GLOD4Q9HC38 313 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 PCDH12Q9NPG4 1184 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 TRHDEQ9UKU6 1024 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 PHTF1Q9UMS5 762 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 PPIL1Q9Y3C6 166 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 PLXNA2O75051 1894 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 DOCK9Q9BZ29 2069 aa27.1■■□□□ 1.93
SSU72-201ENST00000291386 CA4P22748 312 aa27.09■■□□□ 1.93
SSU72-201ENST00000291386 SKOR1P84550 965 aa27.09■■□□□ 1.93
SSU72-201ENST00000291386 ZNF284Q2VY69 593 aa27.09■■□□□ 1.93
SSU72-201ENST00000291386 SETMARQ53H47 684 aaPredicted RBP27.09■■□□□ 1.93
SSU72-201ENST00000291386 ARMC12Q5T9G4 340 aa27.09■■□□□ 1.93
SSU72-201ENST00000291386 ERAP2Q6P179 960 aa27.09■■□□□ 1.93
SSU72-201ENST00000291386 ASB12Q8WXK4 309 aa27.09■■□□□ 1.93
SSU72-201ENST00000291386 GGT7Q9UJ14 662 aa27.09■■□□□ 1.93
SSU72-201ENST00000291386 ITM2BQ9Y287 266 aa27.09■■□□□ 1.93
SSU72-201ENST00000291386 R3HDM2Q9Y2K5 976 aaKnown RBP27.09■■□□□ 1.93
SSU72-201ENST00000291386 PCDHB9Q9Y5E1 797 aa27.09■■□□□ 1.93
SSU72-201ENST00000291386 ENC1O14682 589 aa27.08■■□□□ 1.93
SSU72-201ENST00000291386 BCAT2O15382 392 aaPredicted RBP27.08■■□□□ 1.93
SSU72-201ENST00000291386 CPP00450 1065 aa27.08■■□□□ 1.93
SSU72-201ENST00000291386 CD68P34810 354 aaPredicted RBP27.08■■□□□ 1.93
SSU72-201ENST00000291386 DARS2Q6PI48 645 aaKnown RBP27.08■■□□□ 1.93
SSU72-201ENST00000291386 ZNF567Q8N184 647 aa27.08■■□□□ 1.93
SSU72-201ENST00000291386 PIH1D2Q8WWB5 315 aa27.08■■□□□ 1.93
SSU72-201ENST00000291386 FAM118BQ9BPY3 351 aa27.08■■□□□ 1.93
SSU72-201ENST00000291386 C1QTNF2Q9BXJ5 285 aa27.08■■□□□ 1.93
SSU72-201ENST00000291386 MIR1-1HGQ9H1L0 117 aa27.08■■□□□ 1.93
SSU72-201ENST00000291386 USP29Q9HBJ7 922 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms