RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 PDZD4Q76G19 769 aaPredicted RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 GATAD2AQ86YP4 633 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SPATA2LQ8IUW3 424 aaPredicted RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 OR9I1Q8NGQ6 314 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 CDC26Q8NHZ8 85 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 DACT3Q96B18 629 aaPredicted RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 RNF157Q96PX1 679 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 TWNKQ96RR1 684 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 TOR3AQ9H497 397 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 ST3GAL5Q9UNP4 418 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 KCNH4Q9UQ05 1017 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 NCF1BA6NI72 391 aaPredicted RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 NCF1CA8MVU1 366 aaPredicted RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 TSPAN1O60635 241 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SNAI1O95863 264 aaPredicted RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 NCF1P14598 390 aaPredicted RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 NCK1P16333 377 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SLC18A2Q05940 514 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 CCDC85BQ15834 202 aaPredicted RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 TRIM60Q495X7 471 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 PLD6Q8N2A8 252 aaKnown RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 MAPK15Q8TD08 544 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SLC29A1Q99808 456 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 CNPY3Q9BT09 278 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SPON2Q9BUD6 331 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 STN1Q9H668 368 aaKnown RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 ARHGEF4Q9NR80 690 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 PGAP2Q9UHJ9 254 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SF3B1O75533 1304 aaKnown RBP eCLIP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 CAPN14A8MX76 684 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 RNF103O00237 685 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 TRDMT1O14717 391 aaKnown RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 FUCA1P04066 466 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SLC18A1P54219 525 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 TPI1P60174 286 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 PIGFQ07326 219 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SNX17Q15036 470 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SCARA3Q6AZY7 606 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 NEK10Q6ZWH5 1172 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 ZC3H7AQ8IWR0 971 aaKnown RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 PCYOX1LQ8NBM8 494 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SHCBP1Q8NEM2 672 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 URGCPQ8TCY9 931 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 CLIP3Q96DZ5 547 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 MFSD3Q96ES6 412 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 CEP19Q96LK0 163 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 REXO4Q9GZR2 422 aaKnown RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 ELOVL4Q9GZR5 314 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 HAPLN2Q9GZV7 340 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 NAA50Q9GZZ1 169 aaKnown RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SARS2Q9NP81 518 aaKnown RBP11.09□□□□□ -0.63
ACTC1-201ENST00000290378 STARD7Q9NQZ5 370 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 SUN2Q9UH99 717 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 RAD54BQ9Y620 910 aa11.09□□□□□ -0.63
ACTC1-201ENST00000290378 MYO1GB0I1T2 1018 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 E7ENX8 843 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 TRUB2O95900 331 aaKnown RBP11.08□□□□□ -0.64
ACTC1-201ENST00000290378 EDN1P05305 212 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 TKTL1P51854 596 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 CDC42EP1Q00587 391 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 BBS5Q8N3I7 341 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 PLD5Q8N7P1 536 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 POC5Q8NA72 575 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 ISOC1Q96CN7 298 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 TRIM15Q9C019 465 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 ROGDIQ9GZN7 287 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 SIAEQ9HAT2 523 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 SSU72Q9NP77 194 aaKnown RBP11.08□□□□□ -0.64
ACTC1-201ENST00000290378 EXD2Q9NVH0 621 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 DNAJB4Q9UDY4 337 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 SEPT3Q9UH03 358 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 TEX264Q9Y6I9 313 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 CDK5RAP2Q96SN8 1893 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 CITO14578 2027 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 TRIM38O00635 465 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 CHADO15335 359 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 ASNA1O43681 348 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 ERBB2P04626 1255 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 GNAO1P09471 354 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 ALOX12P18054 663 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 CDK9P50750 372 aaKnown RBP11.08□□□□□ -0.64
ACTC1-201ENST00000290378 COPZ1P61923 177 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 TGFBIQ15582 683 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 ZNF423Q2M1K9 1284 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 BOLA3Q53S33 107 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 AARS2Q5JTZ9 985 aaKnown RBP11.08□□□□□ -0.64
ACTC1-201ENST00000290378 SDHAF4Q5VUM1 108 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 RNF111Q6ZNA4 994 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 SLC41A1Q8IVJ1 513 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 SPNS2Q8IVW8 549 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.08□□□□□ -0.64
ACTC1-201ENST00000290378 SUN5Q8TC36 379 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 CELF6Q96J87 481 aaKnown RBP11.08□□□□□ -0.64
ACTC1-201ENST00000290378 SNRNP25Q9BV90 132 aaKnown RBP11.08□□□□□ -0.64
ACTC1-201ENST00000290378 DPEP3Q9H4B8 488 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 RAD21L1Q9H4I0 556 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 ORC6Q9Y5N6 252 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 U3KQV3 271 aa11.08□□□□□ -0.64
ACTC1-201ENST00000290378 KIAA1551Q9HCM1 1747 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms