RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 DGKKQ5KSL6 1271 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 GPR142Q7Z601 462 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 SATL1Q86VE3 508 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 LRRC52Q8N7C0 313 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 GPR63Q9BZJ6 419 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 DMTF1Q9Y222 760 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 SNX8Q9Y5X2 465 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 STYXL1Q9Y6J8 313 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 NRCAMQ92823 1304 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 MYBPHLA2RUH7 354 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 STX7O15400 261 aaKnown RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 ATG7O95352 703 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 NR4A1P22736 598 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC16A1P53985 500 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 MPP1Q00013 466 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 KLF10Q13118 480 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 GRM3Q14832 879 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 PRKD1Q15139 912 aaPredicted RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 PTRHD1Q6GMV3 140 aaKnown RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 FSTL4Q6MZW2 842 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 FAM35AQ86V20 835 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 ZDHHC13Q8IUH4 622 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 DCP1BQ8IZD4 617 aaKnown RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 MYLPFQ96A32 169 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 EXOC2Q96KP1 924 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 PHF12Q96QT6 1004 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 H2AFY2Q9P0M6 372 aaPredicted RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 LIMD1Q9UGP4 676 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 MKL2Q9ULH7 1088 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 YJEFN3A6XGL0 299 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 CBX4O00257 560 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 AMHP03971 560 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 PIK3R1P27986 724 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 CCT8P50990 548 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 DDX39BQ13838 428 aaKnown RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 TRIP4Q15650 581 aaPredicted RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 TYW3Q6IPR3 259 aaKnown RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 FAM45BPQ6NSW5 357 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 NEK10Q6ZWH5 1172 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 CENPLQ8N0S6 344 aaPredicted RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 MYO1HQ8N1T3 1032 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 OTUB1Q96FW1 271 aaPredicted RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 C12orf42Q96LP6 360 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 C7orf26Q96N11 449 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 QKIQ96PU8 341 aaKnown RBP eCLIP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 RHOBTB2Q9BYZ6 727 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 RPL26L1Q9UNX3 145 aaKnown RBP12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 LRP5O75197 1615 aa12.64□□□□□ -0.39
SLC6A1-201ENST00000287766 MDM4O15151 490 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 GLP2RO95838 553 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 OR1E1P30953 314 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 SEPHS1P49903 392 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 IRF9Q00978 393 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 SNX17Q15036 470 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 FSCN1Q16658 493 aaKnown RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 PFKFB4Q16877 469 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 CTXN3Q4LDR2 81 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 ARL13AQ5H913 290 aaPredicted RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 SAMD4BQ5PRF9 694 aaKnown RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 TRIQKQ629K1 86 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 ZNF57Q68EA5 555 aaPredicted RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 SFRP1Q8N474 314 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 TRPC4APQ8TEL6 797 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 ITFG2Q969R8 447 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 ADAM2Q99965 735 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 SLC7A8Q9UHI5 535 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 FBXO5Q9UKT4 447 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 PSAT1Q9Y617 370 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 CITO14578 2027 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 GPR182O15218 404 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 KATNA1O75449 491 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 WFS1O76024 890 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 CHRNGP07510 517 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 DARSP14868 501 aaKnown RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 PITX1P78337 314 aaPredicted RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 KCNJ11Q14654 390 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 FAM98BQ52LJ0 330 aaKnown RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 TMEM198Q66K66 360 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 DENND6AQ8IWF6 608 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 PQLC1Q8N2U9 271 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 PPTC7Q8NI37 304 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 ACMSDQ8TDX5 336 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 OSCP1Q8WVF1 389 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 FAR2Q96K12 515 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 GATA5Q9BWX5 397 aaPredicted RBP12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 HDHD2Q9H0R4 259 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 SMPD4Q9NXE4 827 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 EHD3Q9NZN3 535 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 NDUFAF1Q9Y375 327 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 A8MX80 341 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 KRT6BP04259 564 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 RBP1P09455 135 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 NMBRP28336 390 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 KRT6CP48668 564 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 LILRA4P59901 499 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 IQSEC1Q6DN90 963 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 ELMSAN1Q6PJG2 1045 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 HFE2Q6ZVN8 426 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 STRADAQ7RTN6 431 aa12.63□□□□□ -0.39
SLC6A1-201ENST00000287766 PQLC3Q8N755 202 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms