RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 KCNA5P22460 613 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 GRK2P25098 689 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 SKIV2L2P42285 1042 aaKnown RBP6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 ABL2P42684 1182 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 SLC11A2P49281 568 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 CLNS1AP54105 237 aaKnown RBP6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 FAM189BP81408 668 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 NSUN2Q08J23 767 aaKnown RBP eCLIP6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 UGP2Q16851 508 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 MUM1Q2TAK8 710 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 USP41Q3LFD5 358 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 CCDC153Q494R4 210 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 HECTD3Q5T447 861 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 TXNDC8Q6A555 127 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 LRRC8EQ6NSJ5 796 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 POTEHQ6S545 545 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 INPP5DQ92835 1189 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 USP13Q92995 863 aaPredicted RBP6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 ERLEC1Q96DZ1 483 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 PTCD3Q96EY7 689 aaKnown RBP6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 GPR22Q99680 433 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 CINPQ9BW66 212 aaPredicted RBP6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 POLR1EQ9GZS1 481 aaKnown RBP6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 RNF38Q9H0F5 515 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 SMG9Q9H0W8 520 aaKnown RBP6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 TCF7L2Q9NQB0 619 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 TRPM5Q9NZQ8 1165 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 TAGLN3Q9UI15 199 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 ZDHHC2Q9UIJ5 367 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 VPS28Q9UK41 221 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 WASF2Q9Y6W5 498 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 PDCD11Q14690 1871 aaKnown RBP6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 TRPM7Q96QT4 1865 aa6.09□□□□□ -1.43
TNFSF4-201ENST00000281834 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 H0Y626 953 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 KLF11O14901 512 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 DLX3O60479 287 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 KLKB1P03952 638 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 MPOP05164 745 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 CKMP06732 381 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 CTPS1P17812 591 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 ITGB6P18564 788 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 CCND1P24385 295 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 GKP32189 559 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 MAP2K2P36507 400 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 ARCN1P48444 511 aaKnown RBP6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 NUDT2P50583 147 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 ZNF135P52742 658 aaPredicted RBP6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 CSE1LP55060 971 aaKnown RBP6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 OXCT1P55809 520 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 SMAD3P84022 425 aaKnown RBP6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 CDK18Q07002 472 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 SLC20A2Q08357 652 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 ZNF177Q13360 481 aaPredicted RBP6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 BTG3Q14201 252 aaPredicted RBP6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 ATXN7L2Q5T6C5 722 aaPredicted RBP6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 CLEC6AQ6EIG7 209 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 SMYD5Q6GMV2 418 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 LAYNQ6UX15 382 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 ISLR2Q6UXK2 745 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 SDCCAG8Q86SQ7 713 aaPredicted RBP6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 DEFB107AQ8IZN7 70 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 ARL14EPQ8N8R7 260 aaPredicted RBP6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 SLAIN1Q8ND83 568 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 SLC26A7Q8TE54 656 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 ANKRD49Q8WVL7 239 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 BEGAINQ9BUH8 593 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 UBE2OQ9C0C9 1292 aaKnown RBP6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 TLE6Q9H808 572 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 RNPEPL1Q9HAU8 725 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 TMEM39AQ9NV64 488 aa6.09□□□□□ -1.44
TNFSF4-201ENST00000281834 KNL1Q8NG31 2342 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 LRRC14BA6NHZ5 514 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PSMD3O43242 534 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 ZBTB14O43829 449 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 SIX3O95343 332 aaPredicted RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 GOT2P00505 430 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 C1RP00736 705 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 SERPINA6P08185 405 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 ENO3P13929 434 aaPredicted RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 TFEBP19484 476 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 FGFR3P22607 806 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 FMO4P31512 558 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 CDKN1CP49918 316 aaPredicted RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 COPAP53621 1224 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 GNA12Q03113 381 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 SERINC3Q13530 473 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 TSTD2Q5T7W7 516 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 C6orf163Q5TEZ5 329 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 RNF219Q5W0B1 726 aaPredicted RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 SEL1L3Q68CR1 1132 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 CYS1Q717R9 158 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 TAS2R42Q7RTR8 314 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 SCUBE1Q8IWY4 988 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 UMODL1-AS1Q8N2C9 162 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 LRRC43Q8N309 656 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 TXNDC5Q8NBS9 432 aaKnown RBP6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 OR4K2Q8NGD2 314 aa6.08□□□□□ -1.44
TNFSF4-201ENST00000281834 PYDC1Q8WXC3 89 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms