RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PIGNO95427 931 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 JCHAINP01591 159 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 SBK3P0C264 359 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 PABPC4LP0CB38 370 aaKnown RBP13.04□□□□□ -0.32
C9orf3-201ENST00000277198 SLC35E2BP0CK96 405 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 PEX2P28328 305 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 PCSK1P29120 753 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 NUDT2P50583 147 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 DNAJB13P59910 316 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 RAB10P61026 200 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 BTG3Q14201 252 aaPredicted RBP13.04□□□□□ -0.32
C9orf3-201ENST00000277198 PIGGQ5H8A4 983 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 LPCAT4Q643R3 524 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 SLC24A5Q71RS6 500 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 TMC7Q7Z402 723 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 MARVELD2Q8N4S9 558 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 ZMIZ2Q8NF64 920 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 PCED1BQ96HM7 432 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 SPATA16Q9BXB7 569 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 SHCBP1LQ9BZQ2 653 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 TKTL2Q9H0I9 626 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 ZBTB26Q9HCK0 441 aa13.04□□□□□ -0.32
C9orf3-201ENST00000277198 MRPL40Q9NQ50 206 aaKnown RBP13.04□□□□□ -0.32
C9orf3-201ENST00000277198 CPSF2Q9P2I0 782 aaKnown RBP13.04□□□□□ -0.32
C9orf3-201ENST00000277198 A0A087X1B8 175 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 SMIM31A0A1B0GVY4 71 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 MEIS3P2A8K0S8 358 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 HHLA1C9JL84 531 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 TK2O00142 265 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 MAP3K13O43283 966 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 CHRNGP07510 517 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 PAMP19021 973 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 MPSTP25325 297 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 ALDH1A3P47895 512 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 ERFP50548 548 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 AQP4P55087 323 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 NSUN2Q08J23 767 aaKnown RBP eCLIP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 DYNC1I2Q13409 638 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 RARS2Q5T160 578 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 LRRC8EQ6NSJ5 796 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 BHLHA9Q7RTU4 235 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 PIWIL4Q7Z3Z4 852 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 SNX32Q86XE0 403 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 LRRC49Q8IUZ0 686 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 FSTL5Q8N475 847 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 FIBCD1Q8N539 461 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 FBXO22Q8NEZ5 403 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 SHKBP1Q8TBC3 707 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 ADAM32Q8TC27 787 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 CCDC126Q96EE4 140 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 MAELQ96JY0 434 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 FAR2Q96K12 515 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 MRPL57Q9BQC6 102 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 TRIM4Q9C037 500 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 DMAP1Q9NPF5 467 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 ENTPD7Q9NQZ7 604 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 UTP6Q9NYH9 597 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 NCKIPSDQ9NZQ3 722 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 RAB26Q9ULW5 256 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 RUVBL2Q9Y230 463 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 E2F8A0AVK6 867 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 AIM2O14862 343 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 FGF10O15520 208 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 AHSGP02765 367 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 CAPNS1P04632 268 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 STMN1P16949 149 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 HOXC13P31276 330 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 RPL9P32969 192 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 CTNNB1P35222 781 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 GMPRP36959 345 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 CHN2P52757 468 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 NAGLUP54802 743 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 ILF2Q12905 390 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 ZNF423Q2M1K9 1284 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 TWF2Q6IBS0 349 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 KIAA0408Q6ZU52 694 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 CENPLQ8N0S6 344 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 PPHLN1Q8NEY8 458 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 ADCY4Q8NFM4 1077 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 GABPB2Q8TAK5 448 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 HAPLN3Q96S86 360 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 IL12RB2Q99665 862 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 DDX50Q9BQ39 737 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 TBL1YQ9BQ87 522 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 PRKD2Q9BZL6 878 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 MRPL46Q9H2W6 279 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 WDR55Q9H6Y2 383 aaPredicted RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 PIDD1Q9HB75 910 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 VCX3AQ9NNX9 186 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 DTNAQ9Y4J8 743 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 PCDHB7Q9Y5E2 793 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 COMMD3-BMI1R4GMX3 469 aa13.03□□□□□ -0.32
C9orf3-201ENST00000277198 MYO18AQ92614 2054 aaKnown RBP13.03□□□□□ -0.32
C9orf3-201ENST00000277198 MYBPHLA2RUH7 354 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 SORBS2O94875 1100 aaKnown RBP13.02□□□□□ -0.32
C9orf3-201ENST00000277198 TPH1P17752 444 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 PAX3P23760 479 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 EPHA3P29320 983 aa13.02□□□□□ -0.32
C9orf3-201ENST00000277198 ARCN1P48444 511 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms