RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CHKBQ9Y259 395 aa16.5■□□□□ 0.23
TPM1-201ENST00000267996 MYO9BQ13459 2157 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 NEDD8-MDP1E9PL57 170 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 SMAD6O43541 496 aaKnown RBP16.49■□□□□ 0.23
TPM1-201ENST00000267996 ZNF821O75541 412 aaPredicted RBP16.49■□□□□ 0.23
TPM1-201ENST00000267996 FSHRP23945 695 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 PSMA3P25788 255 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 SPRP35270 261 aaPredicted RBP16.49■□□□□ 0.23
TPM1-201ENST00000267996 LIMK2P53671 638 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 TRAF2Q12933 501 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 DMC1Q14565 340 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 SMAD1Q15797 465 aaKnown RBP16.49■□□□□ 0.23
TPM1-201ENST00000267996 FUT11Q495W5 492 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 RARS2Q5T160 578 aaKnown RBP16.49■□□□□ 0.23
TPM1-201ENST00000267996 OR13J1Q8NGT2 312 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 TIFAQ96CG3 184 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 ASB16Q96NS5 453 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 FBXO10Q9UK96 956 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 HS3ST2Q9Y278 367 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 PCDHGC4Q9Y5F7 938 aa16.49■□□□□ 0.23
TPM1-201ENST00000267996 FZD6O60353 706 aa16.48■□□□□ 0.23
TPM1-201ENST00000267996 ALDOAP04075 364 aaKnown RBP16.48■□□□□ 0.23
TPM1-201ENST00000267996 MAGEA12P43365 314 aa16.48■□□□□ 0.23
TPM1-201ENST00000267996 HYAL1Q12794 435 aa16.48■□□□□ 0.23
TPM1-201ENST00000267996 FAM78AQ5JUQ0 283 aa16.48■□□□□ 0.23
TPM1-201ENST00000267996 EFHBQ8N7U6 833 aa16.48■□□□□ 0.23
TPM1-201ENST00000267996 TCP10LQ8TDR4 215 aa16.48■□□□□ 0.23
TPM1-201ENST00000267996 ISG20Q96AZ6 181 aaKnown RBP16.48■□□□□ 0.23
TPM1-201ENST00000267996 TRPV4Q9HBA0 871 aa16.48■□□□□ 0.23
TPM1-201ENST00000267996 MLXIPLQ9NP71 852 aa16.48■□□□□ 0.23
TPM1-201ENST00000267996 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.48■□□□□ 0.233e-7■■□□□ 13.4
TPM1-201ENST00000267996 GGA2Q9UJY4 613 aa16.48■□□□□ 0.23
TPM1-201ENST00000267996 PRRC2BQ5JSZ5 2229 aaKnown RBP16.48■□□□□ 0.23
TPM1-201ENST00000267996 ANKRD36A6QL64 1941 aa16.48■□□□□ 0.23
TPM1-201ENST00000267996 GOLGA8TH3BQL2 631 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 SLC7A4O43246 635 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 TIMM44O43615 452 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 PDHA1P08559 390 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 PABPC1P11940 636 aaKnown RBP16.47■□□□□ 0.23
TPM1-201ENST00000267996 SRCP12931 536 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 CTSOP43234 321 aaPredicted RBP16.47■□□□□ 0.23
TPM1-201ENST00000267996 MAPK8P45983 427 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 ATXN7L2Q5T6C5 722 aaPredicted RBP16.47■□□□□ 0.23
TPM1-201ENST00000267996 NEPROQ6NW34 567 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 SYCE2Q6PIF2 218 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 BCAS4Q8TDM0 211 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 OSCP1Q8WVF1 389 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 DYDC1Q8WWB3 177 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 FGF13Q92913 245 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 SMARCD2Q92925 531 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 CHMP6Q96FZ7 201 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 MAGEB18Q96M61 343 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 CCT8L2Q96SF2 557 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 FAM167BQ9BTA0 163 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 ADGRE3Q9BY15 652 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 NSUN3Q9H649 340 aaKnown RBP16.47■□□□□ 0.23
TPM1-201ENST00000267996 IGFLR1Q9H665 355 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 GDE1Q9NZC3 331 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 GGT7Q9UJ14 662 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 SPO11Q9Y5K1 396 aa16.47■□□□□ 0.23
TPM1-201ENST00000267996 COPEO14579 308 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 HOXC11O43248 304 aaPredicted RBP16.46■□□□□ 0.23
TPM1-201ENST00000267996 FAM107AO95990 144 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 DHRS4L1P0CG22 281 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 GABRB3P28472 473 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 CRHR1P34998 444 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 VIPR2P41587 438 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 ETV4P43268 484 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 IL9RQ01113 521 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 SULT2A1Q06520 285 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 DHCR24Q15392 516 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 QPCTQ16769 361 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 UGP2Q16851 508 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 EML3Q32P44 896 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 DGKKQ5KSL6 1271 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 ANKRD54Q6NXT1 300 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 KIAA0408Q6ZU52 694 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 ADIPOR2Q86V24 386 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 ZC3HC1Q86WB0 502 aaKnown RBP16.46■□□□□ 0.23
TPM1-201ENST00000267996 TDHQ8IZJ6 230 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 DCLK2Q8N568 766 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 C2CD4AQ8NCU7 369 aaPredicted RBP16.46■□□□□ 0.23
TPM1-201ENST00000267996 BLOC1S5Q8TDH9 187 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 STYXQ8WUJ0 223 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 MFSD1Q9H3U5 465 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 RHOJQ9H4E5 214 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 DUS2Q9NX74 493 aaKnown RBP16.46■□□□□ 0.23
TPM1-201ENST00000267996 OBP2AQ9NY56 170 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 KCTD3Q9Y597 815 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 CDH23Q9H251 3354 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.46■□□□□ 0.23
TPM1-201ENST00000267996 ANKRD66B4E2M5 251 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 TPP1O14773 563 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 AHSGP02765 367 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 CYP17A1P05093 508 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 PRKCGP05129 697 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 DRD4P21917 467 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 HADHAP40939 763 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 ARSDP51689 593 aa16.46■□□□□ 0.23
TPM1-201ENST00000267996 THOC5Q13769 683 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms