RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 OLAHQ9NV23 265 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 TSC2P49815 1807 aa17.03■□□□□ 0.32
RTN1-201ENST00000267484 ARHGAP10A1A4S6 786 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 UBFD1O14562 309 aaKnown RBP17.02■□□□□ 0.32
RTN1-201ENST00000267484 TRIM24O15164 1050 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 FOXD2O60548 495 aaPredicted RBP17.02■□□□□ 0.32
RTN1-201ENST00000267484 SEC24DO94855 1032 aaPredicted RBP17.02■□□□□ 0.32
RTN1-201ENST00000267484 CAPNS1P04632 268 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 CCDC166P0CW27 439 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 SMIM10L2AP0DMW4 78 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 SMIM10L2BP0DMW5 78 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 CPB1P15086 417 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 ATP5F1P24539 256 aaPredicted RBP17.02■□□□□ 0.32
RTN1-201ENST00000267484 CD151P48509 253 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 HSPA13P48723 471 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 CDH13P55290 713 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 PAN2Q504Q3 1202 aaKnown RBP17.02■□□□□ 0.32
RTN1-201ENST00000267484 PIWIL4Q7Z3Z4 852 aaKnown RBP17.02■□□□□ 0.32
RTN1-201ENST00000267484 LIMS2Q7Z4I7 341 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 ZNF597Q96LX8 424 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 DNAI2Q9GZS0 605 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 KATNBL1Q9H079 304 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 A0A0J9YVX5 310 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 PPP6CO00743 305 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 MTSS1O43312 755 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 AKAP10O43572 662 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 KCNC1P48547 511 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 TMED1Q13445 227 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 SNX17Q15036 470 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 CPNE9Q8IYJ1 553 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 FAM47BQ8NA70 645 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 SMG8Q8ND04 991 aaKnown RBP17.02■□□□□ 0.32
RTN1-201ENST00000267484 PPHLN1Q8NEY8 458 aaKnown RBP17.02■□□□□ 0.32
RTN1-201ENST00000267484 DDI1Q8WTU0 396 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 SENP8Q96LD8 212 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 C3orf30Q96M34 536 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 SUCOQ9UBS9 1254 aaKnown RBP17.02■□□□□ 0.32
RTN1-201ENST00000267484 EGFL7Q9UHF1 273 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 AURKCQ9UQB9 309 aa17.02■□□□□ 0.32
RTN1-201ENST00000267484 MYLKQ15746 1914 aa17.02■□□□□ 0.31
RTN1-201ENST00000267484 TMX2-CTNND1H3BSU7 103 aa17.02■□□□□ 0.31
RTN1-201ENST00000267484 CXCL11O14625 94 aa17.02■□□□□ 0.31
RTN1-201ENST00000267484 DYNC1LI2O43237 492 aaPredicted RBP17.02■□□□□ 0.31
RTN1-201ENST00000267484 NPHS1O60500 1241 aa17.02■□□□□ 0.31
RTN1-201ENST00000267484 C8BP07358 591 aa17.02■□□□□ 0.31
RTN1-201ENST00000267484 HSPA1AP0DMV8 641 aaKnown RBP17.02■□□□□ 0.31
RTN1-201ENST00000267484 HSPA1BP0DMV9 641 aaKnown RBP17.02■□□□□ 0.31
RTN1-201ENST00000267484 LRPAP1P30533 357 aa17.02■□□□□ 0.31
RTN1-201ENST00000267484 USP41Q3LFD5 358 aa17.02■□□□□ 0.31
RTN1-201ENST00000267484 FSD1LQ9BXM9 530 aa17.02■□□□□ 0.31
RTN1-201ENST00000267484 SPAG4Q9NPE6 437 aa17.02■□□□□ 0.31
RTN1-201ENST00000267484 NSMCE4AQ9NXX6 385 aa17.02■□□□□ 0.31
RTN1-201ENST00000267484 BRCA2P51587 3418 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 H6PDO95479 791 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 CLIC3O95833 236 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 HLA-DQB2P05538 268 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 ATP6V1B2P21281 511 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 STT3AP46977 705 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 PRKAA2P54646 552 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 UGP2Q16851 508 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 TWF2Q6IBS0 349 aaKnown RBP17.01■□□□□ 0.31
RTN1-201ENST00000267484 CYHR1Q6ZMK1 362 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 ZBTB49Q6ZSB9 765 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 CHSY3Q70JA7 882 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 LPCAT2Q7L5N7 544 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 BHLHA9Q7RTU4 235 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 LINC00523Q86TU6 105 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 ATPAF2Q8N5M1 289 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 ARHGEF38Q9NXL2 777 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 RSL24D1Q9UHA3 163 aaKnown RBP17.01■□□□□ 0.31
RTN1-201ENST00000267484 TCAF1Q9Y4C2 921 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 MSI1O43347 362 aaKnown RBP17.01■□□□□ 0.31
RTN1-201ENST00000267484 HTRA2O43464 458 aaPredicted RBP17.01■□□□□ 0.31
RTN1-201ENST00000267484 HK2P52789 917 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 SH3BGRP55822 239 aaPredicted RBP17.01■□□□□ 0.31
RTN1-201ENST00000267484 PLOD1Q02809 727 aaPredicted RBP17.01■□□□□ 0.31
RTN1-201ENST00000267484 STX5Q13190 355 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 FAM83EQ2M2I3 478 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 CARM1Q86X55 608 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 TOP6BLQ8N6T0 577 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 SNRNP27Q8WVK2 155 aaKnown RBP17.01■□□□□ 0.31
RTN1-201ENST00000267484 HSPBAP1Q96EW2 488 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 VAT1Q99536 393 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 PAAF1Q9BRP4 392 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 GLOD4Q9HC38 313 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 VTA1Q9NP79 307 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 TREHO43280 583 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 SNRPB2P08579 225 aaKnown RBP17.01■□□□□ 0.31
RTN1-201ENST00000267484 COL6A2P12110 1019 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 CHRM3P20309 590 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 HCAR3P49019 387 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 EMP3P54852 163 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 TECRLQ5HYJ1 363 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 NEPROQ6NW34 567 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 PIM3Q86V86 326 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 RETREG3Q86VR2 466 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 ANKRD13AQ8IZ07 590 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 C3orf58Q8NDZ4 430 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 RIN3Q8TB24 985 aa17.01■□□□□ 0.31
RTN1-201ENST00000267484 SLC39A8Q9C0K1 460 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms