RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 MRPS22P82650 360 aaKnown RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 BEX3Q00994 111 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 NRG1Q02297 640 aaPredicted RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 LSAMPQ13449 338 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 PTK2BQ14289 1009 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 PDCD2Q16342 344 aaPredicted RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 GRAMD1BQ3KR37 738 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 BTBD8Q5XKL5 378 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 TRIM67Q6ZTA4 783 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 KIAA0408Q6ZU52 694 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 ARPINQ7Z6K5 226 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 LRRTM3Q86VH5 581 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 ATPAF2Q8N5M1 289 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 PPHLN1Q8NEY8 458 aaKnown RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 CEP70Q8NHQ1 597 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 SPPL2BQ8TCT7 592 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 PKP2Q99959 881 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 SLC2A11Q9BYW1 496 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 TRPV6Q9H1D0 765 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 NOL6Q9H6R4 1146 aaKnown RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 SUDS3Q9H7L9 328 aaPredicted RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 ST3GAL5Q9UNP4 418 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 GIT1Q9Y2X7 761 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 PCDHGA7Q9Y5G6 932 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 SMIM31A0A1B0GVY4 71 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 MYADML2A6NDP7 307 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 CCDC85CA6NKD9 419 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 TRPC5OSA6NMA1 111 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 DFFAO00273 331 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 TNFRSF10BO14763 440 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 PAGE1O75459 146 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 CRTAMO95727 393 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 TFAP2AP05549 437 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 BDNFP23560 247 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 MSX2P35548 267 aaPredicted RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 CHRNA4P43681 627 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 CPT1AP50416 773 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 INHBCP55103 352 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 MRPS6P82932 125 aaKnown RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 PURAQ00577 322 aaKnown RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 GALNT1Q10472 559 aaPredicted RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 LRP8Q14114 963 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 ZNF789Q5FWF6 425 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 RBM20Q5T481 1227 aaKnown RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 LHX8Q68G74 356 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 C8orf82Q6P1X6 216 aaPredicted RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 CYHR1Q6ZMK1 362 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 SCD5Q86SK9 330 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 SPNS2Q8IVW8 549 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 NAT14Q8WUY8 206 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 LPPQ93052 612 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 DUS3LQ96G46 650 aaKnown RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 MARK4Q96L34 752 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 UBXN10Q96LJ8 280 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 PRICKLE1Q96MT3 831 aaPredicted RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 PPP1R2P1Q96PQ5 205 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 OLFM1Q99784 485 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 TRIM4Q9C037 500 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 MEAF6Q9HAF1 191 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 CHST12Q9NRB3 414 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 NCKIPSDQ9NZQ3 722 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 CNOT11Q9UKZ1 510 aaKnown RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 PCDHGB4Q9UN71 923 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 PCDHGB5Q9Y5G0 923 aa12.55□□□□□ -0.4
BEST3-201ENST00000266661 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.55□□□□□ -0.4
BEST3-201ENST00000266661 TNRC18O15417 2968 aaPredicted RBP12.54□□□□□ -0.4
BEST3-201ENST00000266661 PATJQ8NI35 1801 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 NEMP2A6NFY4 417 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 KCNU1A8MYU2 1149 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 M0QZQ0 153 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 TRIM38O00635 465 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 FBP2O00757 339 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 TRIM24O15164 1050 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 C8BP07358 591 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 ENO3P13929 434 aaPredicted RBP12.54□□□□□ -0.4
BEST3-201ENST00000266661 LEPRP48357 1165 aaKnown RBP12.54□□□□□ -0.4
BEST3-201ENST00000266661 SCNN1GP51170 649 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 IHHQ14623 411 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 PPP2R5DQ14738 602 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 PSMD5Q16401 504 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 RASIP1Q5U651 963 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 RWDD4Q6NW29 188 aaKnown RBP12.54□□□□□ -0.4
BEST3-201ENST00000266661 NEPROQ6NW34 567 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 TAF2Q6P1X5 1199 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 GALNT7Q86SF2 657 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 CATSPER1Q8NEC5 780 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 BHLHE22Q8NFJ8 381 aaPredicted RBP12.54□□□□□ -0.4
BEST3-201ENST00000266661 SCAMP5Q8TAC9 235 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 USP13Q92995 863 aaPredicted RBP12.54□□□□□ -0.4
BEST3-201ENST00000266661 FATE1Q969F0 183 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 ELMO2Q96JJ3 720 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 RANBP9Q96S59 729 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 NPAS2Q99743 824 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 TRIM62Q9BVG3 475 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 KATNAL1Q9BW62 490 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 PRKD2Q9BZL6 878 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 SIK2Q9H0K1 926 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 SMOC2Q9H3U7 446 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 POMKQ9H5K3 350 aa12.54□□□□□ -0.4
BEST3-201ENST00000266661 ZNF696Q9H7X3 374 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms