RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 ATL1Q8WXF7 558 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 STARD8Q92502 1023 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 RGSL1A5PLK6 1076 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 KPNA5O15131 536 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 MAP3K13O43283 966 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 ULK1O75385 1050 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 FAM155BO75949 473 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 WARSP23381 471 aaKnown RBP14.08□□□□□ -0.16
CDH3-201ENST00000264012 L1CAMP32004 1257 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 PTGIRP43119 386 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 NAA20P61599 178 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 EML3Q32P44 896 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 TAC4Q86UU9 113 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 BHLHE22Q8NFJ8 381 aaPredicted RBP14.08□□□□□ -0.16
CDH3-201ENST00000264012 OR6K2Q8NGY2 324 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 CXorf40AQ8TE69 158 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 DLG3Q92796 817 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 SHISA4Q96DD7 197 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 KLHL28Q9NXS3 571 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 SNX6Q9UNH7 406 aa14.08□□□□□ -0.16
CDH3-201ENST00000264012 C5orf60A6NFR6 353 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 DYRK3O43781 588 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 SERPINA6P08185 405 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 COX7A2P14406 83 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 CDC25CP30307 473 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 HPCAL1P37235 193 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 DAOAP59103 153 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 ARHGAP17Q68EM7 881 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 KRT78Q8N1N4 520 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 TMCO5AQ8N6Q1 288 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 ACTRT2Q8TDY3 377 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 SH3GL2Q99962 352 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 CHRAC1Q9NRG0 131 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 PLK2Q9NYY3 685 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 BTRCQ9Y297 605 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 PLLPQ9Y342 182 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 ATP6AP2A0A1C7CYW4 349 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 ATP6AP2O75787 350 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 PARNO95453 639 aaKnown RBP14.07□□□□□ -0.16
CDH3-201ENST00000264012 GLUD1P00367 558 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 HGFP14210 728 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 GPRIN3Q6ZVF9 776 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 COPS8Q99627 209 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 KRCC1Q9NPI7 259 aaPredicted RBP14.07□□□□□ -0.16
CDH3-201ENST00000264012 DDX28Q9NUL7 540 aaKnown RBP14.07□□□□□ -0.16
CDH3-201ENST00000264012 FBXO10Q9UK96 956 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 AP2A1O95782 977 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 C1RP00736 705 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 YBEYP58557 167 aaPredicted RBP14.07□□□□□ -0.16
CDH3-201ENST00000264012 CES5AQ6NT32 575 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 ZNF438Q7Z4V0 828 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 FAM228AQ86W67 206 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 TPD52L3Q96J77 140 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 ZNF839A8K0R7 811 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 IMPDH2P12268 514 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 HPGDP15428 266 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 LAG3P18627 525 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 CORO1AP31146 461 aaKnown RBP14.07□□□□□ -0.16
CDH3-201ENST00000264012 GPR1P46091 355 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 CDH13P55290 713 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 USP4Q13107 963 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 FAM187BQ17R55 369 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 CCDC92Q53HC0 331 aaPredicted RBP14.07□□□□□ -0.16
CDH3-201ENST00000264012 LYPLAL1Q5VWZ2 237 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 RAET1GQ6H3X3 334 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 FUT10Q6P4F1 479 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 RHBDF2Q6PJF5 856 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 SCIMPQ6UWF3 145 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 FAM151BQ6UXP7 276 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 ALYREFQ86V81 257 aaKnown RBP14.07□□□□□ -0.16
CDH3-201ENST00000264012 UTP15Q8TED0 518 aaKnown RBP14.07□□□□□ -0.16
CDH3-201ENST00000264012 FBXL18Q96ME1 805 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 GBA3Q9H227 469 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 PNPOQ9NVS9 261 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 CFAP97Q9P2B7 532 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 PACSIN3Q9UKS6 424 aa14.07□□□□□ -0.16
CDH3-201ENST00000264012 ROBO1Q9Y6N7 1651 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 HTR7P34969 479 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 GPD2P43304 727 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 PSME3P61289 254 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 POU5F1Q01860 360 aaKnown RBP14.06□□□□□ -0.16
CDH3-201ENST00000264012 RSPH1Q8WYR4 309 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 LINGO1Q96FE5 620 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 BBS4Q96RK4 519 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 ZNF184Q99676 751 aaPredicted RBP14.06□□□□□ -0.16
CDH3-201ENST00000264012 ROGDIQ9GZN7 287 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 ADPRHL2Q9NX46 363 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 USE1Q9NZ43 259 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 AZIN1O14977 448 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 MAGEC1O60732 1142 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 GCATO75600 419 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 IL1BP01584 269 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 TACR2P21452 398 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 CCNCP24863 283 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 CRHR1P34998 444 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 SLC1A5Q15758 541 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 QPCTQ16769 361 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 RBFAQ8N0V3 343 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 ZNF567Q8N184 647 aa14.06□□□□□ -0.16
CDH3-201ENST00000264012 PCDH19Q8TAB3 1148 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms