RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 SLC15A2Q16348 729 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 VPS45Q9NRW7 570 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 SLC9A3R1O14745 358 aaPredicted RBP17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 OTCP00480 354 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 OR52K1Q8NGK4 314 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 DNAJB14Q8TBM8 379 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 C18orf25Q96B23 403 aaPredicted RBP17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 VPS35Q96QK1 796 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 SHBGP04278 402 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 BMP7P18075 431 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 MFSD10Q14728 455 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 GPRIN3Q6ZVF9 776 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 UNC93AQ86WB7 457 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 ARMC8Q8IUR7 673 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 ITCHQ96J02 903 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 PGLYRP2Q96PD5 576 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 MCCC1Q96RQ3 725 aaPredicted RBP17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 RAP2CQ9Y3L5 183 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 F8VP50 259 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 AVILO75366 819 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 CST1P01037 141 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 FTH1P02794 183 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 ATXN3LQ9H3M9 355 aa17.58■□□□□ 0.4
NOTCH3-201ENST00000263388 SLC26A3P40879 764 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 ZHX1-C8orf76Q96EF9 292 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 CHST7Q9NS84 486 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 URADA6NGE7 173 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 GLRA2P23416 452 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 RPL5P46777 297 aaKnown RBP17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 DPYSQ14117 519 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 CYP2W1Q8TAV3 490 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 FAM237BA0A1B0GVD1 139 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 PRKG2Q13237 762 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 ZC3H7AQ8IWR0 971 aaKnown RBP17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 COX4I2Q96KJ9 171 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 TBC1D30Q9Y2I9 924 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 PAX3P23760 479 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 TRAP1Q12931 704 aaKnown RBP17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 BICRALQ6AI39 1079 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 AGAP11Q8TF27 550 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 ZYG11BQ9C0D3 744 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 CCNB1IP1Q9NPC3 277 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 GSAPA4D1B5 854 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 NUDT17P0C025 328 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 DNAJC1Q96KC8 554 aaKnown RBP17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 MARK4Q96L34 752 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 PDCD2LQ9BRP1 358 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 ST3GAL5Q9UNP4 418 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 TMCC2O75069 709 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 CDH3P22223 829 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 CAMK1Q14012 370 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 SLC39A12Q504Y0 691 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 ZNF304Q9HCX3 659 aa17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 TIMM13Q9Y5L4 95 aaPredicted RBP17.57■□□□□ 0.4
NOTCH3-201ENST00000263388 OPLAHO14841 1288 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 TSPAN3O60637 253 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 FAUP35544 74 aaKnown RBP17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 ROR2Q01974 943 aaKnown RBP17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 NRCAMQ92823 1304 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 LIN7AO14910 233 aaPredicted RBP17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 LRIG2O94898 1065 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 GPAT3Q53EU6 434 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 RNF44Q7L0R7 432 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 COLGALT2Q8IYK4 626 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 TEX47Q8TBZ9 253 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 RERGQ96A58 199 aaPredicted RBP17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 AK5Q9Y6K8 562 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 USP12O75317 370 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 SERPINB7O75635 380 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 UBAP2LQ14157 1087 aaKnown RBP17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 ASB8Q9H765 288 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 KPNA3O00505 521 aaPredicted RBP17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 FARP2O94887 1054 aaPredicted RBP17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 TGDSO95455 350 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 DPEP1P16444 411 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 CES1P23141 567 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 EPHX2P34913 555 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 ZNF846Q147U1 533 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 UNC5AQ6ZN44 842 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 FAM129BQ96TA1 746 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 ACE2Q9BYF1 805 aaPredicted RBP17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 ZFP14Q9HCL3 533 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 LRRC10BA6NIK2 292 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 PLGRKTQ9HBL7 147 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 STX16-NPEPL1H3BU86 382 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 STX16O14662 325 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 CREMQ03060 361 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 LSM12Q3MHD2 195 aaKnown RBP17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 WDR59Q6PJI9 974 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 TRAV19A0A0A6YYK7 116 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 CXCL11O14625 94 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 C16orf46Q6P387 395 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 ELMO1Q92556 727 aa17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 WBP11Q9Y2W2 641 aaKnown RBP17.56■□□□□ 0.4
NOTCH3-201ENST00000263388 TRIM38O00635 465 aa17.55■□□□□ 0.4
NOTCH3-201ENST00000263388 HDAC3O15379 428 aa17.55■□□□□ 0.4
NOTCH3-201ENST00000263388 CYP3A4P08684 503 aa17.55■□□□□ 0.4
NOTCH3-201ENST00000263388 PSME3P61289 254 aa17.55■□□□□ 0.4
NOTCH3-201ENST00000263388 UROC1Q96N76 676 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms