RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 PCNAP12004 261 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 GLULP15104 373 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 OR3A3P47888 321 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 OR1G1P47890 313 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 MERTKQ12866 999 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 ZNF366Q8N895 744 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 OR8K3Q8NH51 312 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 ZNF420Q8TAQ5 688 aaPredicted RBP13.08□□□□□ -0.32
TMEM260-201ENST00000261556 PADI4Q9UM07 663 aa13.08□□□□□ -0.32
TMEM260-201ENST00000261556 NCANO14594 1321 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 RRN3P2A6NIE6 340 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 LOC110117498-PIK3R3F6TDL0 507 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 TCEA3O75764 348 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 ARHGDIAP52565 204 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 STILQ15468 1287 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 MAPRE2Q15555 327 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 CBWD2Q8IUF1 395 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 RDM1Q8NG50 284 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 DHX38Q92620 1227 aaKnown RBP13.07□□□□□ -0.32
TMEM260-201ENST00000261556 PIH1D1Q9NWS0 290 aaKnown RBP13.07□□□□□ -0.32
TMEM260-201ENST00000261556 NUMBLQ9Y6R0 609 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 LDLRP01130 860 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 ACADSBP45954 432 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 VBP1P61758 197 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 SREBF2Q12772 1141 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 DESI1Q6ICB0 168 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 PLEKHH3Q7Z736 793 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 ACTL9Q8TC94 416 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 SPATC1LQ9H0A9 340 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 COG4Q9H9E3 785 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 TMEM8AQ9HCN3 771 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 COMMD8Q9NX08 183 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 ABI2Q9NYB9 513 aaPredicted RBP13.07□□□□□ -0.32
TMEM260-201ENST00000261556 TJP2Q9UDY2 1190 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.07□□□□□ -0.32
TMEM260-201ENST00000261556 TBX20Q9UMR3 447 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 MYO9BQ13459 2157 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 B3GAT3O94766 335 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 HMBSP08397 361 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 FNBP1LQ5T0N5 605 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 KDELC2Q7Z4H8 507 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 C8orf59Q8N0T1 100 aaPredicted RBP13.07□□□□□ -0.32
TMEM260-201ENST00000261556 CAMKK1Q8N5S9 505 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 PJA1Q8NG27 643 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 SH3YL1Q96HL8 342 aaPredicted RBP13.07□□□□□ -0.32
TMEM260-201ENST00000261556 PNMA5Q96PV4 448 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 GFM1Q96RP9 751 aaKnown RBP13.07□□□□□ -0.32
TMEM260-201ENST00000261556 CBWD1Q9BRT8 395 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 MROH8Q9H579 483 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 TASP1Q9H6P5 420 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 SP110Q9HB58 689 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 DIABLOQ9NR28 239 aa13.07□□□□□ -0.32
TMEM260-201ENST00000261556 EIF3DO15371 548 aaKnown RBP eCLIP13.06□□□□□ -0.32
TMEM260-201ENST00000261556 KCNN4O15554 427 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 GNAO1P09471 354 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 AGAP7PQ5VUJ5 663 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 MFSD7Q6UXD7 560 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 SPATC1Q76KD6 591 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 ADAMTS16Q8TE57 1224 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 PCNPQ8WW12 178 aaKnown RBP13.06□□□□□ -0.32
TMEM260-201ENST00000261556 ACDQ96AP0 544 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 PHOX2BQ99453 314 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 IL12RB2Q99665 862 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 SLC29A1Q99808 456 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 TINF2Q9BSI4 451 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 SARS2Q9NP81 518 aaKnown RBP13.06□□□□□ -0.32
TMEM260-201ENST00000261556 PLLPQ9Y342 182 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 TCRBV9S1A1TA0A576 114 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 MAGEB16A2A368 324 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 EI24O14681 340 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 SLURP2P0DP57 97 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 ROR1Q01973 937 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 FPGSQ05932 587 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 RUNX1T1Q06455 604 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 C21orf62-AS1Q17RA5 79 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 RASSF6Q6ZTQ3 369 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 RNF180Q86T96 592 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 KBTBD6Q86V97 674 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 HPDLQ96IR7 371 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 C1orf21Q9H246 121 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 IKZF4Q9H2S9 585 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 TMEM191CA6NGB0 347 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 MRASO14807 208 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 ADAMTS3O15072 1205 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 CCNE2O96020 404 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 BPGMP07738 259 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 POLR2CP19387 275 aaPredicted RBP13.06□□□□□ -0.32
TMEM260-201ENST00000261556 TAGLNQ01995 201 aaKnown RBP13.06□□□□□ -0.32
TMEM260-201ENST00000261556 CDK18Q07002 472 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 INAVAQ3KP66 663 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 LSM12Q3MHD2 195 aaKnown RBP13.06□□□□□ -0.32
TMEM260-201ENST00000261556 DGLUCYQ7Z3D6 616 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 BTLAQ7Z6A9 289 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 LGI2Q8N0V4 545 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 GAD1Q99259 594 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 APOL4Q9BPW4 351 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 NIF3L1Q9GZT8 377 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 MID2Q9UJV3 735 aa13.06□□□□□ -0.32
TMEM260-201ENST00000261556 TRPC5OSA6NMA1 111 aa13.05□□□□□ -0.32
TMEM260-201ENST00000261556 ADM5C9JUS6 153 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms