RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 ZBTB33Q86T24 672 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 SPARTQ8N0X7 666 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 CPXCR1Q8N123 301 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 CDYL2Q8N8U2 506 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 UTP15Q8TED0 518 aaKnown RBP8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 RHBDF1Q96CC6 855 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 SIPA1Q96FS4 1042 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 AURKBQ96GD4 344 aaPredicted RBP8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 GLT1D1Q96MS3 346 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 CPXM1Q96SM3 734 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 EXD2Q9NVH0 621 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 UBQLN2Q9UHD9 624 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 DGKBQ9Y6T7 804 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 A0A1W2PPM1 405 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 TCRBV9S1A1TA0A576 114 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 CHST10O43529 356 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 TIPRLO75663 272 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 SCELO95171 688 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 TPSB2P20231 275 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 RBP5P82980 135 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 PPATQ06203 517 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 TPSAB1Q15661 275 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 ZNF404Q494X3 552 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 ALFQ53S48 1182 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 MFSD7Q6UXD7 560 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 PHF13Q86YI8 300 aaPredicted RBP8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 IRF2BP1Q8IU81 584 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 ZZZ3Q8IYH5 903 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 FAM71AQ8IYT1 594 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 MCOLN3Q8TDD5 553 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 HDAC2Q92769 488 aaKnown RBP8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 SLC47A1Q96FL8 570 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 MKRN2Q9H000 416 aaKnown RBP8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 POMKQ9H5K3 350 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 CYP3A43Q9HB55 503 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 TMEM98Q9Y2Y6 226 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 TBX1O43435 398 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 LGR5O75473 907 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 ARIH2O95376 493 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 MLYCDO95822 493 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 CSF1RP07333 972 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 GRIA4P48058 902 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 SLC7A2P52569 658 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 MOGSQ13724 837 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 NFE2L1Q14494 772 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 ASTE1Q2TB18 679 aaPredicted RBP8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 TTLL9Q3SXZ7 439 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 SLC27A3Q5K4L6 730 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 PKN3Q6P5Z2 889 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 SLC2A7Q6PXP3 512 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 CHPT1Q8WUD6 406 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 EEF1AKMT1Q8WVE0 214 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 C7orf43Q8WVR3 580 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 LRTOMTQ8WZ04 291 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 ARL5BQ96KC2 179 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 FRMD6Q96NE9 622 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 ROGDIQ9GZN7 287 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 FARSBQ9NSD9 589 aaKnown RBP8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 SLAIN2Q9P270 581 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 SEC14L4Q9UDX3 406 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 INVSQ9Y283 1065 aa8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 TNPO3Q9Y5L0 923 aaKnown RBP8.38□□□□□ -1.07
SNCAIP-201ENST00000261367 BCLAF3A2AJT9 711 aaKnown RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 OR6C70A6NIJ9 312 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 RGS14O43566 566 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 HMBSP08397 361 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 ALDH9A1P49189 494 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 CDH4P55283 916 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 WDR4P57081 412 aaKnown RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 TNFAIP1Q13829 316 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 CLPPQ16740 277 aaPredicted RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 PGS1Q32NB8 556 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 TPRG1LQ5T0D9 272 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 SPESP1Q6UW49 350 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 SH3BP5LQ7L8J4 393 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 EPHX4Q8IUS5 362 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 LPCAT1Q8NF37 534 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 ZFP28Q8NHY6 868 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 ZUFSPQ96AP4 578 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 PHOX2BQ99453 314 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 CGRRF1Q99675 332 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 MTMR12Q9C0I1 747 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 TBX20Q9UMR3 447 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 JAG2Q9Y219 1238 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 RREB1Q92766 1687 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 AKAP8O43823 692 aaKnown RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 ACO1P21399 889 aaKnown RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 IDH3AP50213 366 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 ETV1P50549 477 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 PGDP52209 483 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 CCNA1P78396 465 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 PITPNAQ00169 270 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 GNA12Q03113 381 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 MXD4Q14582 209 aaPredicted RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 PAOXQ6QHF9 649 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 BRINP3Q76B58 766 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 LHFPL3Q86UP9 236 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 SLC47A2Q86VL8 602 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 CHERPQ8IWX8 916 aaKnown RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 TEX47Q8TBZ9 253 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms