RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CES5AQ6NT32 575 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 KLHL24Q6TFL4 600 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 DEF8Q6ZN54 512 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 VSIG10LQ86VR7 867 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 TMEM199Q8N511 208 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 MAB21L3Q8N8X9 362 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 IKZF4Q9H2S9 585 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 ATAD3AQ9NVI7 634 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 VPS4AQ9UN37 437 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 CYP4B1P13584 511 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 CDC42P60953 191 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 PLPP4Q5VZY2 271 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 CKAP2Q8WWK9 683 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 PGM2Q96G03 612 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 CLEC4MQ9H2X3 399 aaPredicted RBP12.17□□□□□ -0.46
COL8A1-201ENST00000261037 PRDM12Q9H4Q4 367 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 GOLGA2P5Q9HBQ8 144 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 SAR1AQ9NR31 198 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 MSRAQ9UJ68 235 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 IKZF3Q9UKT9 509 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 VAV3Q9UKW4 847 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 hCG_1818297A0A087WSY0 165 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 NR2F1P10589 423 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 TTPAP49638 278 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 PURAQ00577 322 aaKnown RBP12.17□□□□□ -0.46
COL8A1-201ENST00000261037 SEMA5AQ13591 1074 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 PSMD5Q16401 504 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 ZNF697Q5TEC3 545 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 ANKRD52Q8NB46 1076 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 BAP1Q92560 729 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 RERGQ96A58 199 aaPredicted RBP12.17□□□□□ -0.46
COL8A1-201ENST00000261037 EPB41L1Q9H4G0 881 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 AGO1Q9UL18 857 aaKnown RBP12.17□□□□□ -0.46
COL8A1-201ENST00000261037 C15orf41Q9Y2V0 281 aa12.17□□□□□ -0.46
COL8A1-201ENST00000261037 A0A1W2PQH9 124 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 C1QTNF3-AMACRE9PGA6 284 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 KRT33AO76009 404 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 FARP2O94887 1054 aaPredicted RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 USP41Q3LFD5 358 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 GPRIN3Q6ZVF9 776 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 FAM220AQ7Z4H9 259 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 HIPK1Q86Z02 1210 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 FAM71AQ8IYT1 594 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 CERS5Q8N5B7 392 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 TRPM4Q8TD43 1214 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 GINS4Q9BRT9 223 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 NXF3Q9H4D5 531 aaKnown RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ZNF232Q9UNY5 417 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 PCDHGC5Q9Y5F6 944 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ATP6AP2A0A1C7CYW4 349 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 SLC28A1O00337 649 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 KPNA4O00629 521 aaPredicted RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ERAL1O75616 437 aaKnown RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ATP6AP2O75787 350 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 MFN2O95140 757 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 HGFP14210 728 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ERCC2P18074 760 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 PSME3P61289 254 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 SPESP1Q6UW49 350 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 RASAL3Q86YV0 1011 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 FIBCD1Q8N539 461 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 MMADHCQ9H3L0 296 aaPredicted RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 CIDEBQ9UHD4 219 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ANGPT4Q9Y264 503 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 GMPPBQ9Y5P6 360 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 OR4Q2P0C623 313 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 PRG2P13727 222 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 UQCRBP14927 111 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ATP5F1P24539 256 aaPredicted RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 PSMD7P51665 324 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 SLC25A24Q6NUK1 477 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ARHGAP36Q6ZRI8 547 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 SH3RF1Q7Z6J0 888 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 PIWIL2Q8TC59 973 aaKnown RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ART4Q93070 314 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 C15orf38-AP3S2A0A0A6YYH1 394 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 MAGEC1O60732 1142 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 EPHA3P29320 983 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 LPIN1Q14693 890 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 MAPKAPK3Q16644 382 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 SPANXN2Q5MJ10 180 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ARPINQ7Z6K5 226 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 KBTBD2Q8IY47 623 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 KLHL23Q8NBE8 558 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 HJURPQ8NCD3 748 aaPredicted RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ZNF184Q99676 751 aaPredicted RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 FANCEQ9HB96 536 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 SNX15Q9NRS6 342 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 AKAP7Q9P0M2 348 aaPredicted RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ADAM28Q9UKQ2 775 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 KLRC4O43908 158 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 FTH1P02794 183 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ITGAVP06756 1048 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ITGA2BP08514 1039 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 FKBP1AP62942 108 aaKnown RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 MRPS5P82675 430 aaKnown RBP12.16□□□□□ -0.46
COL8A1-201ENST00000261037 ITGADQ13349 1161 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 EEF1DP3Q658K8 133 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 KIAA0408Q6ZU52 694 aa12.16□□□□□ -0.46
COL8A1-201ENST00000261037 FAIM2Q9BWQ8 316 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms