RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 PLEKHH3Q7Z736 793 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 METTL23Q86XA0 190 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 PGAM4Q8N0Y7 254 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 SH3RF2Q8TEC5 729 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 STYXQ8WUJ0 223 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 ANKRD49Q8WVL7 239 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 CYGBQ8WWM9 190 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 TUBGCP3Q96CW5 907 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 CNGB3Q9NQW8 809 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 DNAJB4Q9UDY4 337 aa13.61□□□□□ -0.23
VHL-201ENST00000256474 NCAM2O15394 837 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 ATP5BP06576 529 aaKnown RBP13.6□□□□□ -0.23
VHL-201ENST00000256474 APOA4P06727 396 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 EFEMP1Q12805 493 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 CYS1Q717R9 158 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 HERC6Q8IVU3 1022 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 AFAP1L2Q8N4X5 818 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 C6orf203Q9P0P8 240 aaPredicted RBP13.6□□□□□ -0.23
VHL-201ENST00000256474 MTSS1O43312 755 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 ANXA9O76027 345 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 BAIAP3O94812 1187 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 GALNT2Q10471 571 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 PIGGQ5H8A4 983 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 METTL21CQ5VZV1 264 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 KLHDC10Q6PID8 442 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 ARHGAP22Q7Z5H3 698 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 TOP6BLQ8N6T0 577 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 KDM1BQ8NB78 822 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 CASP10Q92851 521 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 SPON2Q9BUD6 331 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 FAM105AQ9NUU6 356 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 TIMM22Q9Y584 194 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 LTBP3Q9NS15 1303 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 A0A0U1RQS6 177 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 HEATR9A2RTY3 570 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 TCAF2A6NFQ2 919 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 PYGLP06737 847 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 LINC00032P0C843 101 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 WARSP23381 471 aaKnown RBP13.6□□□□□ -0.23
VHL-201ENST00000256474 INHBEP58166 350 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 MYBPC1Q00872 1141 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 GALNT3Q14435 633 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 TMEM259Q4ZIN3 620 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 ALKAL1Q6UXT8 129 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 LCA5Q86VQ0 697 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 SPPL2CQ8IUH8 684 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 DNAJB14Q8TBM8 379 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 BRI3BPQ8WY22 251 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 CNDP1Q96KN2 507 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 SLC2A13Q96QE2 648 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 OSBPL2Q9H1P3 480 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 SOX17Q9H6I2 414 aaPredicted RBP13.6□□□□□ -0.23
VHL-201ENST00000256474 MID1IP1Q9NPA3 183 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 KCNH4Q9UQ05 1017 aa13.6□□□□□ -0.23
VHL-201ENST00000256474 SRP72O76094 671 aaKnown RBP13.59□□□□□ -0.23
VHL-201ENST00000256474 ITGB1P05556 798 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 RPL5P46777 297 aaKnown RBP13.59□□□□□ -0.23
VHL-201ENST00000256474 GPR15P49685 360 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 USP46P62068 366 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 SULT2A1Q06520 285 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 TSTD2Q5T7W7 516 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 CLEC14AQ86T13 490 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 SPATA2LQ8IUW3 424 aaPredicted RBP13.59□□□□□ -0.23
VHL-201ENST00000256474 METTL25Q8N6Q8 603 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 ZFP28Q8NHY6 868 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 TRPC4APQ8TEL6 797 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 TBATAQ96M53 351 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 SEPHS2Q99611 448 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 SLC29A1Q99808 456 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 SEMA4BQ9NPR2 832 aaPredicted RBP13.59□□□□□ -0.23
VHL-201ENST00000256474 PRPF19Q9UMS4 504 aaKnown RBP13.59□□□□□ -0.23
VHL-201ENST00000256474 PRORSD1PA6NEY8 169 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 ARL5CA6NH57 179 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 TRPC5OSA6NMA1 111 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 A8MT66 165 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 SUPT3HO75486 399 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 F9P00740 461 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 TFAP2AP05549 437 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 ATP5F1P24539 256 aaPredicted RBP13.59□□□□□ -0.23
VHL-201ENST00000256474 CDK18Q07002 472 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 SLC10A7Q0GE19 358 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 AGAP9Q5VTM2 703 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 KCTD11Q693B1 232 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 REP15Q6BDI9 236 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 RNF217Q8TC41 542 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 NOD1Q9Y239 953 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 TCAF1Q9Y4C2 921 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 ACTL7AQ9Y615 435 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 NCK1P16333 377 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 PCSK1P29120 753 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 LHX1P48742 406 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 RPS6KA3P51812 740 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 OGFRL1Q5TC84 451 aaPredicted RBP13.59□□□□□ -0.23
VHL-201ENST00000256474 LRRTM3Q86VH5 581 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 FAM47BQ8NA70 645 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 CANT1Q8WVQ1 401 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 BHMTQ93088 406 aa13.59□□□□□ -0.23
VHL-201ENST00000256474 NSUN5Q96P11 429 aaKnown RBP13.59□□□□□ -0.23
VHL-201ENST00000256474 C1QTNF1Q9BXJ1 281 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms