RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 PPARDQ03181 441 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 NR0B2Q15466 257 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 UGP2Q16851 508 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 CFAP58Q5T655 872 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 ERMARDQ5T6L9 678 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 MACC1Q6ZN28 852 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 EFL1Q7Z2Z2 1120 aaKnown RBP21.27■■□□□ 1
NEDD8-201ENST00000250495 RBFAQ8N0V3 343 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 AOPEPQ8N6M6 819 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 GRAMD1AQ96CP6 724 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 EXOC2Q96KP1 924 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 BBC3Q96PG8 261 aaPredicted RBP21.27■■□□□ 1
NEDD8-201ENST00000250495 DHX35Q9H5Z1 703 aaKnown RBP21.27■■□□□ 1
NEDD8-201ENST00000250495 PRORYQ9H606 182 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 TAS2R14Q9NYV8 317 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 AP4E1Q9UPM8 1137 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 IGSF10Q6WRI0 2623 aa21.27■■□□□ 1
NEDD8-201ENST00000250495 TMCO5BA8MYB1 307 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 LMO7DNF2Z398 122 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 J3KR12 359 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 EEF2KO00418 725 aaKnown RBP21.26■□□□□ 0.99
NEDD8-201ENST00000250495 DAPK3O43293 454 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 PRAMEF11O60813 436 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 PIGNO95427 931 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 ANXA6P08133 673 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 TYRO3Q06418 890 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 C1orf61Q13536 156 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 LRRC14Q15048 493 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 PLEKHA7Q6IQ23 1121 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 ERAP2Q6P179 960 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 BRAT1Q6PJG6 821 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 UBL7Q96S82 380 aaPredicted RBP21.26■□□□□ 0.99
NEDD8-201ENST00000250495 SYT11Q9BT88 431 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 BOCQ9BWV1 1114 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 TCEAL2Q9H3H9 227 aaPredicted RBP21.26■□□□□ 0.99
NEDD8-201ENST00000250495 POLR1BQ9H9Y6 1135 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 PDFQ9HBH1 243 aa21.26■□□□□ 0.99
NEDD8-201ENST00000250495 RTN4Q9NQC3 1192 aaKnown RBP21.26■□□□□ 0.99
NEDD8-201ENST00000250495 TSPAN11A1L157 253 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 SMTNL1A8MU46 457 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 TEX33O43247 280 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 LZTS3O60299 673 aaPredicted RBP21.25■□□□□ 0.99
NEDD8-201ENST00000250495 GCATO75600 419 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 RNF8O76064 485 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 DXOO77932 396 aaKnown RBP21.25■□□□□ 0.99
NEDD8-201ENST00000250495 MPOP05164 745 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 TGM2P21980 687 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 CSNK1DP48730 415 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 PAPOLAP51003 745 aaKnown RBP21.25■□□□□ 0.99
NEDD8-201ENST00000250495 GABREP78334 506 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 CCDC173Q0VFZ6 552 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 ISXQ2M1V0 245 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 FILIP1LQ4L180 1135 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 C6orf132Q5T0Z8 1188 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 GUSBP11Q6P575 273 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 FSTL5Q8N475 847 aaPredicted RBP21.25■□□□□ 0.99
NEDD8-201ENST00000250495 ZNF248Q8NDW4 579 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 SCG3Q8WXD2 468 aaKnown RBP21.25■□□□□ 0.99
NEDD8-201ENST00000250495 NAT6Q93015 286 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 CELF6Q96J87 481 aaKnown RBP21.25■□□□□ 0.99
NEDD8-201ENST00000250495 TUBGCP5Q96RT8 1024 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 LRRC61Q9BV99 259 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 SLC39A8Q9C0K1 460 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 GPATCH2LQ9NWQ4 482 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 PCSK1NQ9UHG2 260 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 RAI2Q9Y5P3 530 aa21.25■□□□□ 0.99
NEDD8-201ENST00000250495 YY2O15391 372 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 PALMO75781 387 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 GZMAP12544 262 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 TSHRP16473 764 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 HTR1BP28222 390 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 PCBP4P57723 403 aaKnown RBP21.24■□□□□ 0.99
NEDD8-201ENST00000250495 ERVPABLB-1P60509 514 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 IRF4Q15306 451 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 ASIC2Q16515 512 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 ESRP1Q6NXG1 681 aaKnown RBP21.24■□□□□ 0.99
NEDD8-201ENST00000250495 SRLQ86TD4 932 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 WDR48Q8TAF3 677 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 LGMNQ99538 433 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 PCDH12Q9NPG4 1184 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 PNMA8BQ9ULN7 279 aaPredicted RBP21.24■□□□□ 0.99
NEDD8-201ENST00000250495 DOLKQ9UPQ8 538 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 COQ6Q9Y2Z9 468 aa21.24■□□□□ 0.99
NEDD8-201ENST00000250495 PTPRQQ9UMZ3 2332 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 RP1P56715 2156 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 TMEM191CA6NGB0 347 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 LRRC53A6NM62 1247 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 MUSKO15146 869 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 PRPSAP2O60256 369 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 BUB1BO60566 1050 aaPredicted RBP21.23■□□□□ 0.99
NEDD8-201ENST00000250495 TCEA3O75764 348 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 C6P13671 934 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 CTSEP14091 401 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 ZNF135P52742 658 aaPredicted RBP21.23■□□□□ 0.99
NEDD8-201ENST00000250495 AGERQ15109 404 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 ELOCQ15369 112 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 CA9Q16790 459 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 WSCD2Q2TBF2 565 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 LVRNQ6Q4G3 990 aa21.23■□□□□ 0.99
NEDD8-201ENST00000250495 RBM44Q6ZP01 1051 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms