RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ZXDBP98169 803 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 ACVR1Q04771 509 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 GALNT3Q14435 633 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 RFTN1Q14699 578 aaPredicted RBP18.62■□□□□ 0.57
HOXC11-201ENST00000243082 FAM91A1Q658Y4 838 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 PTAR1Q7Z6K3 402 aaPredicted RBP18.62■□□□□ 0.57
HOXC11-201ENST00000243082 HERC6Q8IVU3 1022 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.62■□□□□ 0.57
HOXC11-201ENST00000243082 PNPLA1Q8N8W4 532 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 GPATCH11Q8N954 259 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 UTP4Q969X6 686 aaKnown RBP18.62■□□□□ 0.57
HOXC11-201ENST00000243082 PTCD3Q96EY7 689 aaKnown RBP18.62■□□□□ 0.57
HOXC11-201ENST00000243082 GPR78Q96P69 363 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 OMDQ99983 421 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 DDX50Q9BQ39 737 aaKnown RBP18.62■□□□□ 0.57
HOXC11-201ENST00000243082 SIKE1Q9BRV8 207 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 CINPQ9BW66 212 aaPredicted RBP18.62■□□□□ 0.57
HOXC11-201ENST00000243082 MFSD1Q9H3U5 465 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 TRPC7Q9HCX4 862 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 OXSMQ9NWU1 459 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 MAFFQ9ULX9 164 aa18.62■□□□□ 0.57
HOXC11-201ENST00000243082 TK2O00142 265 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 CR2P20023 1033 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 PPM1AP35813 382 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 POU4F1Q01851 419 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 DLG1Q12959 904 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 CYTH1Q15438 398 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 SLC14A2Q15849 920 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 RBM20Q5T481 1227 aaKnown RBP18.61■□□□□ 0.57
HOXC11-201ENST00000243082 RNF219Q5W0B1 726 aaPredicted RBP18.61■□□□□ 0.57
HOXC11-201ENST00000243082 TXNDC8Q6A555 127 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 CILP2Q8IUL8 1156 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 WDR75Q8IWA0 830 aaKnown RBP18.61■□□□□ 0.57
HOXC11-201ENST00000243082 GPR65Q8IYL9 337 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 ARL14EPQ8N8R7 260 aaPredicted RBP18.61■□□□□ 0.57
HOXC11-201ENST00000243082 RDH11Q8TC12 318 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 EBF4Q9BQW3 602 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.61■□□□□ 0.57
HOXC11-201ENST00000243082 PNPOQ9NVS9 261 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.61■□□□□ 0.57
HOXC11-201ENST00000243082 LNPEPQ9UIQ6 1025 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 LAMA2P24043 3122 aaKnown RBP18.61■□□□□ 0.57
HOXC11-201ENST00000243082 TARM1B6A8C7 271 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 TRIM13O60858 407 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 OLFM2O95897 454 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 KRT72Q14CN4 511 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 ZYG11AQ6WRX3 759 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 OTOP2Q7RTS6 562 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 GALNT7Q86SF2 657 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 FSTL5Q8N475 847 aaPredicted RBP18.61■□□□□ 0.57
HOXC11-201ENST00000243082 OR6P1Q8NGX9 317 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 BRSK1Q8TDC3 778 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 BLOC1S5Q8TDH9 187 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 PPP4R1Q8TF05 950 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 STYXQ8WUJ0 223 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 ARMC5Q96C12 935 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 NXNL1Q96CM4 212 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 ZBP1Q9H171 429 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.61■□□□□ 0.57
HOXC11-201ENST00000243082 PCDHB12Q9Y5F1 795 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 ARL5AQ9Y689 179 aa18.61■□□□□ 0.57
HOXC11-201ENST00000243082 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.6■□□□□ 0.57
HOXC11-201ENST00000243082 OR51F1A6NGY5 319 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 CBX4O00257 560 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 SCAMP3O14828 347 aaKnown RBP18.6■□□□□ 0.57
HOXC11-201ENST00000243082 INSIG1O15503 277 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 FGF18O76093 207 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 NDST3O95803 873 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 LATS1O95835 1130 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 CD160O95971 181 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 CNPP09543 421 aaKnown RBP18.6■□□□□ 0.57
HOXC11-201ENST00000243082 LINC00271P0C7V0 271 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 GLRBP48167 497 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 RASSF2P50749 326 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 SCNN1BP51168 640 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 MAVSQ7Z434 540 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 ITIH5Q86UX2 942 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 TMEM199Q8N511 208 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 GABPB2Q8TAK5 448 aaPredicted RBP18.6■□□□□ 0.57
HOXC11-201ENST00000243082 PEX13Q92968 403 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 NSL1Q96IY1 281 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 EXOC2Q96KP1 924 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 TBATAQ96M53 351 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 TSNARE1Q96NA8 513 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 TUBB6Q9BUF5 446 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 MID2Q9UJV3 735 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 PLXNA4Q9HCM2 1894 aa18.6■□□□□ 0.57
HOXC11-201ENST00000243082 KIAA1671Q9BY89 1806 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 GFRA2O00451 464 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 ZNF195O14628 629 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 BAIAP3O94812 1187 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 KLHL2O95198 593 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 S1PR4O95977 384 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 C1RP00736 705 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 PIRTP0C851 137 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 CLCN5P51795 746 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 PRAMEP78395 509 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 ARF5P84085 180 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 PTPRCAPQ14761 206 aa18.59■□□□□ 0.57
HOXC11-201ENST00000243082 PABPC1LQ4VXU2 614 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms