RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 KRR1Q13601 381 aaKnown RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 TOR2AQ5JU69 321 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 TBCELQ5QJ74 424 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 RBM48Q5RL73 367 aaKnown RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 TMEM198Q66K66 360 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 PPP1R18Q6NYC8 613 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 TRMT10BQ6PF06 316 aaKnown RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 NAPRTQ6XQN6 538 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 C1orf186Q6ZWK4 172 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 PAGE2Q7Z2X7 111 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 FEZF2Q8TBJ5 459 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 TAS1R2Q8TE23 839 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 CEP170P1Q96L14 293 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 C11orf70Q9BRQ4 267 aa13.12□□□□□ -0.31
MSH2-201ENST00000233146 SLIRPQ9GZT3 109 aaKnown RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 ATF5Q9Y2D1 282 aaPredicted RBP13.12□□□□□ -0.31
MSH2-201ENST00000233146 JUNP05412 331 aaKnown RBP13.11□□□□□ -0.31
MSH2-201ENST00000233146 YES1P07947 543 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 R3HCC1LQ7Z5L2 792 aaKnown RBP13.11□□□□□ -0.31
MSH2-201ENST00000233146 FAM178BQ8IXR5 827 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 FAM83FQ8NEG4 500 aaPredicted RBP13.11□□□□□ -0.31
MSH2-201ENST00000233146 APPL2Q8NEU8 664 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 PROX1Q92786 737 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 PCIF1Q9H4Z3 704 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 IGSF5Q9NSI5 407 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 C3orf70A6NLC5 250 aaPredicted RBP13.11□□□□□ -0.31
MSH2-201ENST00000233146 CHADO15335 359 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 TRIM16O95361 564 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 GFAPP14136 432 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 CYP2A7P20853 494 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 FASP25445 335 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 RPS9P46781 194 aaKnown RBP13.11□□□□□ -0.31
MSH2-201ENST00000233146 DYNLT1P63172 113 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 CCNA1P78396 465 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 RHAGQ02094 409 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 SYCE2Q6PIF2 218 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 CMTR2Q8IYT2 770 aaKnown RBP13.11□□□□□ -0.31
MSH2-201ENST00000233146 MUS81Q96NY9 551 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 STRA6Q9BX79 667 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 NOS1APO75052 506 aaPredicted RBP13.11□□□□□ -0.31
MSH2-201ENST00000233146 MAGP20916 626 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 ATP6V1B2P21281 511 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 CBLP22681 906 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 NRLP54845 237 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 C1QBPQ07021 282 aaKnown RBP13.11□□□□□ -0.31
MSH2-201ENST00000233146 ACAP2Q15057 778 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 PRSS48Q7RTY5 328 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 NOXA1Q86UR1 476 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 DDIASQ8IXT1 998 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 SHCBP1Q8NEM2 672 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 LRRC20Q8TCA0 184 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 STON2Q8WXE9 905 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 CEP19Q96LK0 163 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 MIR1-1HGQ9H1L0 117 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 FBXL12Q9NXK8 326 aa13.11□□□□□ -0.31
MSH2-201ENST00000233146 USP17L5A8MUK1 530 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 KCNU1A8MYU2 1149 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 H0Y858 1186 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 TPP1O14773 563 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 EXTL3O43909 919 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 ACSL4O60488 711 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 SEMA3DO95025 777 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 HOXB1P14653 301 aaPredicted RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 SHMT2P34897 504 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 GYG1P46976 350 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 SERPINH1P50454 418 aaKnown RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 ZNF677Q86XU0 584 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 SLC22A15Q8IZD6 547 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 SH2D3AQ9BRG2 576 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 SERHL2Q9H4I8 314 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 ANKHQ9HCJ1 492 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 TLR9Q9NR96 1032 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 FBXO28Q9NVF7 368 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 ACTR3BQ9P1U1 418 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 COPG1Q9Y678 874 aaKnown RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 TCP10L2B9ZVM9 353 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 ZNF780AO75290 641 aaPredicted RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 INMTO95050 263 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 UQCRC1P31930 480 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 TALDO1P37837 337 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 RPL7AP62424 266 aaKnown RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 ZNF252P-AS1Q0IIN9 211 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 INCA1Q0VD86 236 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 HORMAD1Q86X24 394 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 SLC44A5Q8NCS7 719 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 AGR3Q8TD06 166 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 PPP1R36Q96LQ0 422 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 TWNKQ96RR1 684 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 ADNPQ9H2P0 1102 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 SPAG4Q9NPE6 437 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 EIF3KQ9UBQ5 218 aaKnown RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 PABPN1LA6NDY0 278 aaKnown RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 SLC15A5A6NIM6 579 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 C16orf96A6NNT2 1141 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 A8MV72 311 aaPredicted RBP13.1□□□□□ -0.31
MSH2-201ENST00000233146 CST8O60676 142 aa13.1□□□□□ -0.31
MSH2-201ENST00000233146 ATP2B4P23634 1241 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms