RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 MC4RP32245 332 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 ELP6Q0PNE2 266 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 TRIM16LQ309B1 348 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 TCHHL1Q5QJ38 904 aaPredicted RBP19.06■□□□□ 0.64
SMPD3-201ENST00000219334 CYP2R1Q6VVX0 501 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 ZNF605Q86T29 641 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 ZDHHC13Q8IUH4 622 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 ALLCQ8N6M5 410 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 UPF1Q92900 1129 aaKnown RBP eCLIP19.06■□□□□ 0.64
SMPD3-201ENST00000219334 MFSD14AQ96MC6 490 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 DEPDC5O75140 1603 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 TRIM24O15164 1050 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 PEX11AO75192 247 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 LRRC55Q6ZSA7 311 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 APTXQ7Z2E3 356 aaKnown RBP19.06■□□□□ 0.64
SMPD3-201ENST00000219334 ADGRG2Q8IZP9 1017 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 RNF148Q8N7C7 305 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 GPR156Q8NFN8 814 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 OR6K2Q8NGY2 324 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 DTNBP1Q96EV8 351 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 CDRT15Q96T59 188 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 GOLGA2P5Q9HBQ8 144 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 TPRKBQ9Y3C4 175 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 PCDHA2Q9Y5H9 948 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 KRT75O95678 551 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 NR2F1P10589 423 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 CORO1AP31146 461 aaKnown RBP19.06■□□□□ 0.64
SMPD3-201ENST00000219334 WNT3AP56704 352 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 ST3GAL1Q11201 340 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 TXNDC11Q6PKC3 985 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 HDDC2Q7Z4H3 204 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 NPAS4Q8IUM7 802 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 REXO5Q96IC2 774 aaKnown RBP19.06■□□□□ 0.64
SMPD3-201ENST00000219334 ANGPT4Q9Y264 503 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 ACTL7BQ9Y614 415 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 HMGB3O15347 200 aaKnown RBP19.06■□□□□ 0.64
SMPD3-201ENST00000219334 B4GALT4O60513 344 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 EPHX1P07099 455 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 RAB10P61026 200 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 FUCA2Q9BTY2 467 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 SLC4A5Q9BY07 1137 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 MAF1Q9H063 256 aa19.06■□□□□ 0.64
SMPD3-201ENST00000219334 LRPAP1P30533 357 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 POTEHQ6S545 545 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 ZC3H7AQ8IWR0 971 aaKnown RBP19.05■□□□□ 0.64
SMPD3-201ENST00000219334 GMIPQ9P107 970 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 PIPSLA2A3N6 862 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 CLOCKO15516 846 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 ITGAVP06756 1048 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 FGRP09769 529 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 OR4Q2P0C623 313 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 LRRC10BA6NIK2 292 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 RNASEH2AO75792 299 aaKnown RBP19.05■□□□□ 0.64
SMPD3-201ENST00000219334 OR6B1O95007 311 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 C1RP00736 705 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 MTAPQ13126 283 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 RAVER1Q8IY67 606 aaKnown RBP19.05■□□□□ 0.64
SMPD3-201ENST00000219334 DDHD1Q8NEL9 900 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 HDAC10Q969S8 669 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 FEM1CQ96JP0 617 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 PCDH12Q9NPG4 1184 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 FBXO5Q9UKT4 447 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 WASP42768 502 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 TRIM32Q13049 653 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 SLC30A9Q6PML9 568 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 IZUMO2Q6UXV1 221 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 GPRIN3Q6ZVF9 776 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 R3HCC1LQ7Z5L2 792 aaKnown RBP19.05■□□□□ 0.64
SMPD3-201ENST00000219334 FLCNQ8NFG4 579 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 CD101Q93033 1021 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 KLHL5Q96PQ7 755 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 MRPL57Q9BQC6 102 aaKnown RBP19.05■□□□□ 0.64
SMPD3-201ENST00000219334 CORO2BQ9UQ03 480 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 LYVE1Q9Y5Y7 322 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 ZNF780BQ9Y6R6 833 aa19.05■□□□□ 0.64
SMPD3-201ENST00000219334 CENPXA8MT69 81 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 INHAP05111 366 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 IFI35P80217 286 aaPredicted RBP19.04■□□□□ 0.64
SMPD3-201ENST00000219334 MAPKAPK3Q16644 382 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 FUT10Q6P4F1 479 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 CHST9Q7L1S5 443 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 STRADAQ7RTN6 431 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 ZNF248Q8NDW4 579 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 RNASE11Q8TAA1 199 aaKnown RBP19.04■□□□□ 0.64
SMPD3-201ENST00000219334 LNX1Q8TBB1 728 aaPredicted RBP19.04■□□□□ 0.64
SMPD3-201ENST00000219334 MAML3Q96JK9 1138 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 BTBD10Q9BSF8 475 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 GALNT8Q9NY28 637 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 STX11O75558 287 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 ERVK-21P61565 698 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 PTSQ03393 145 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 OR8H2Q8N162 312 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 TEKT5Q96M29 485 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 ZFP14Q9HCL3 533 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 A0A1W2PQ67 120 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 PRNPP04156 253 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 TSHRP16473 764 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 PSMD8P48556 350 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 ZNF844Q08AG5 666 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 ZFP1Q6P2D0 407 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms