RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ASLP04424 464 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 FAM163BP0C2L3 166 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 ZNF26P17031 533 aaPredicted RBP17.41■□□□□ 0.38
USB1-201ENST00000219281 KCNA5P22460 613 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 CHRNA4P43681 627 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 LHX1P48742 406 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 CRYBB1P53674 252 aaPredicted RBP17.41■□□□□ 0.38
USB1-201ENST00000219281 DNAJB13P59910 316 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 TRIM25Q14258 630 aaKnown RBP17.41■□□□□ 0.38
USB1-201ENST00000219281 PPP1R3AQ16821 1122 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 RBM20Q5T481 1227 aaKnown RBP17.41■□□□□ 0.38
USB1-201ENST00000219281 DNAJC1Q96KC8 554 aaKnown RBP17.41■□□□□ 0.38
USB1-201ENST00000219281 RBM38Q9H0Z9 239 aaKnown RBP17.41■□□□□ 0.38
USB1-201ENST00000219281 AP4S1Q9Y587 144 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 TLL2Q9Y6L7 1015 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 FBP2O00757 339 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 CSPG5O95196 566 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 C1QTNF8P60827 252 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 RALGDSQ12967 914 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 STX5Q13190 355 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 AGKQ53H12 422 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 FAM219BQ5XKK7 198 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 REP15Q6BDI9 236 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 POTEHQ6S545 545 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 ARHGAP12Q8IWW6 846 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 SNX31Q8N9S9 440 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 B4GALNT2Q8NHY0 566 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 LRTOMTQ8WZ04 291 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 EZH1Q92800 747 aaPredicted RBP17.41■□□□□ 0.38
USB1-201ENST00000219281 SLC2A11Q9BYW1 496 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 SLC39A8Q9C0K1 460 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 COQ10BQ9H8M1 238 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 CCDC167Q9P0B6 97 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 SUCOQ9UBS9 1254 aaKnown RBP17.41■□□□□ 0.38
USB1-201ENST00000219281 FBXO5Q9UKT4 447 aa17.41■□□□□ 0.38
USB1-201ENST00000219281 C7orf72A4D263 438 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 UBDO15205 165 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 CPB1P15086 417 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 ADRA1AP35348 466 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 CLCNKBP51801 687 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 AFF1P51825 1210 aaKnown RBP17.4■□□□□ 0.38
USB1-201ENST00000219281 KPNA2P52292 529 aaKnown RBP17.4■□□□□ 0.38
USB1-201ENST00000219281 ZNF33AQ06730 810 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 APOFQ13790 326 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 LRP8Q14114 963 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 FASTKQ14296 549 aaKnown RBP17.4■□□□□ 0.38
USB1-201ENST00000219281 ZNF789Q5FWF6 425 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 CHSY3Q70JA7 882 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 AMIGO2Q86SJ2 522 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 DQX1Q8TE96 717 aaKnown RBP17.4■□□□□ 0.38
USB1-201ENST00000219281 SMARCD1Q96GM5 515 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 FSD1LQ9BXM9 530 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 SENP6Q9GZR1 1112 aaPredicted RBP17.4■□□□□ 0.38
USB1-201ENST00000219281 UNC93B1Q9H1C4 597 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 TREX1Q9NSU2 369 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 CACNA2D2Q9NY47 1150 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 ATXN10Q9UBB4 475 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 CNOT11Q9UKZ1 510 aaKnown RBP17.4■□□□□ 0.38
USB1-201ENST00000219281 NEU3Q9UQ49 428 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 A0A1B0GTW7 788 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 PSMD12O00232 456 aaPredicted RBP17.4■□□□□ 0.38
USB1-201ENST00000219281 MAFKO60675 156 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 PSMC3P17980 439 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 PAMP19021 973 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 FGFR3P22607 806 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 PLK1P53350 603 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 GEMP55040 296 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 POU4F1Q01851 419 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 SQLEQ14534 574 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 BTBD8Q5XKL5 378 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 NEPROQ6NW34 567 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 C3orf58Q8NDZ4 430 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 DDI1Q8WTU0 396 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 LPGAT1Q92604 370 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 IL12RB2Q99665 862 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 OLFM1Q99784 485 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 ARHGEF38Q9NXL2 777 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 PTCH2Q9Y6C5 1203 aa17.4■□□□□ 0.38
USB1-201ENST00000219281 A8MT66 165 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 TNPO2O14787 897 aaKnown RBP17.39■□□□□ 0.37
USB1-201ENST00000219281 MATN3O15232 486 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 HLA-DQB2P05538 268 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 C8BP07358 591 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 CLCN2P51788 898 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 CYTH1Q15438 398 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 FAM83EQ2M2I3 478 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 USP41Q3LFD5 358 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 LRRC23Q53EV4 343 aaPredicted RBP17.39■□□□□ 0.37
USB1-201ENST00000219281 TECRLQ5HYJ1 363 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 NOMO2Q5JPE7 1267 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 RGMBQ6NW40 437 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 CUZD1Q86UP6 607 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 TMEM86AQ8N2M4 240 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 PNPLA1Q8N8W4 532 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 PHF21BQ96EK2 531 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 MEAF6Q9HAF1 191 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 ENTPD7Q9NQZ7 604 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 NDFIP2Q9NV92 336 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 DDX18Q9NVP1 670 aaKnown RBP17.39■□□□□ 0.37
USB1-201ENST00000219281 RBM22Q9NW64 420 aaKnown RBP eCLIP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms