RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 MSI1O43347 362 aaKnown RBP12.09□□□□□ -0.47
TRO-201ENST00000173898 MFSD11O43934 449 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 LINC00032P0C843 101 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 CRHR1P34998 444 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 EPS8Q12929 822 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 USP39Q53GS9 565 aaKnown RBP12.09□□□□□ -0.47
TRO-201ENST00000173898 ARHGAP36Q6ZRI8 547 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 FGD2Q7Z6J4 655 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 ERLEC1Q96DZ1 483 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 TMEM109Q9BVC6 243 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 CHRAC1Q9NRG0 131 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 GNPTGQ9UJJ9 305 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 DERAQ9Y315 318 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 TRAF6Q9Y4K3 522 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 CNTNAP1P78357 1384 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 FGF1P05230 155 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 TPSB2P20231 275 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 CRATP43155 626 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 MAPK8P45983 427 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 ATP6V0D1P61421 351 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 SEMA5AQ13591 1074 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 TPSAB1Q15661 275 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 PHKG1Q16816 387 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 PAGE2BQ5JRK9 111 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 RNASEH2BQ5TBB1 312 aaKnown RBP12.09□□□□□ -0.47
TRO-201ENST00000173898 RSBN1Q5VWQ0 802 aaPredicted RBP12.09□□□□□ -0.47
TRO-201ENST00000173898 B3GNT6Q6ZMB0 384 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 KBTBD2Q8IY47 623 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 C19orf18Q8NEA5 215 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 BPIFB6Q8NFQ5 453 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 OR4L1Q8NH43 312 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 XPNPEP1Q9NQW7 623 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 AGO1Q9UL18 857 aaKnown RBP12.09□□□□□ -0.47
TRO-201ENST00000173898 PRPF19Q9UMS4 504 aaKnown RBP12.09□□□□□ -0.47
TRO-201ENST00000173898 PCDHGC3Q9UN70 934 aa12.09□□□□□ -0.47
TRO-201ENST00000173898 TRAFD1O14545 582 aaPredicted RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 DYRK3O43781 588 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 CHRNB2P17787 502 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 MPSTP25325 297 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 TTKP33981 857 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 RPL5P46777 297 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 AIF1P55008 147 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 TNK2Q07912 1038 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 TUSC3Q13454 348 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 IKBKEQ14164 716 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 INO80DQ53TQ3 878 aaPredicted RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 ZCCHC8Q6NZY4 707 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 MARK2Q7KZI7 788 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 SLC26A9Q7LBE3 791 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 DSG4Q86SJ6 1040 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 PIK3R5Q8WYR1 880 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 ATP13A3Q9H7F0 1226 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 HBS1LQ9Y450 684 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 MRC1P22897 1456 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 ATXN2Q99700 1313 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 ANKDD1BA6NHY2 528 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 TBL1XO60907 577 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 CREB1P16220 341 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 CTPS1P17812 591 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 PAICSP22234 425 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 BNIP1Q12981 228 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 KLF10Q13118 480 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 DCTN2Q13561 401 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 TRIM25Q14258 630 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 PSMD5Q16401 504 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 TIGD2Q4W5G0 525 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 PPM1JQ5JR12 505 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 SPANXN2Q5MJ10 180 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 ADGRD1Q6QNK2 874 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 EPHX4Q8IUS5 362 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 RBM15BQ8NDT2 890 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 WDR36Q8NI36 951 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 BCAS3Q9H6U6 928 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 APOBEC3GQ9HC16 384 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 TMEM216Q9P0N5 145 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 RCOR3Q9P2K3 495 aaPredicted RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 C3orf18Q9UK00 162 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 NID2Q14112 1375 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 IGKV6D-41A0A0C4DH26 115 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 DHRS12A0PJE2 317 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 BCLAF3A2AJT9 711 aaKnown RBP12.08□□□□□ -0.48
TRO-201ENST00000173898 FAM25AB3EWG3 89 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 FAM25CB3EWG5 89 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 FAM25GB3EWG6 89 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 XYLBO75191 536 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 OTCP00480 354 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 RPN2P04844 631 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 ACADMP11310 421 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 FECHP22830 423 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 RXRGP48443 463 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 PSMD7P51665 324 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 DGUOKQ16854 277 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 AAGABQ6PD74 315 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 CNSTQ6PJW8 725 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 OTOP3Q7RTS5 596 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 ZNF438Q7Z4V0 828 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRO-201ENST00000173898 CLEC4DQ8WXI8 215 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 NPAS2Q99743 824 aa12.08□□□□□ -0.48
TRO-201ENST00000173898 TRMOQ9BU70 441 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms