RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 RPP40O75818 363 aaKnown RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 USP1O94782 785 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 SLC11A1P49279 550 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 RASA2Q15283 850 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 TXNDC11Q6PKC3 985 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 MIER2Q8N344 545 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 PTGR2Q8N8N7 351 aaPredicted RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 ACMSDQ8TDX5 336 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 HDAC7Q8WUI4 952 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 PTCD2Q8WV60 388 aaKnown RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 EMID1Q96A84 441 aaPredicted RBP10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 B3GALT6Q96L58 329 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 RHBGQ9H310 441 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 NDUFAF1Q9Y375 327 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 PCDHB1Q9Y5F3 818 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 KCNE2Q9Y6J6 123 aa10.42□□□□□ -0.74
NIPAL3-201ENST00000003912 PAPSS1O43252 624 aaPredicted RBP10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 ATP6V1C1P21283 382 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 IDSP22304 550 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 TRPC1P48995 793 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 IL10RBQ08334 325 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CNSTQ6PJW8 725 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 C17orf99Q6UX52 265 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 TMEM192Q8IY95 271 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CDK20Q8IZL9 346 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CAMKK1Q8N5S9 505 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CELF5Q8N6W0 485 aaKnown RBP10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 AUTS2Q8WXX7 1259 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 PHF21AQ96BD5 680 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 PGM2Q96G03 612 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 IMPAD1Q9NX62 359 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CLIC5Q9NZA1 410 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 TLR6Q9Y2C9 796 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 C2CD4BA6NLJ0 364 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 ATG13O75143 517 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 NOL4O94818 638 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 VNN1O95497 513 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 ZNF682O95780 498 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 TFEBP19484 476 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CALB2P22676 271 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 ABCG1P45844 678 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CCR3P51677 355 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 ACTN3Q08043 901 aaPredicted RBP10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 LINGO4Q6UY18 593 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CRYBG2Q8N1P7 616 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CATSPER2Q96P56 530 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 TRMT61BQ9BVS5 477 aaKnown RBP10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 KCND1Q9NSA2 647 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CCDC154A6NI56 674 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 MATN3O15232 486 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 HS6ST1O60243 411 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 TARSP26639 723 aaKnown RBP10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 S100A3P33764 101 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 IRF5Q13568 498 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 FAM126BQ8IXS8 530 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 TMEM132CQ8N3T6 1108 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 OR7D4Q8NG98 312 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 OR10G6Q8NH81 332 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 ZFP28Q8NHY6 868 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 QKIQ96PU8 341 aaKnown RBP eCLIP10.41□□□□□ -0.742e-11■■■■■ 42
NIPAL3-201ENST00000003912 NDNQ99608 321 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 MRPL57Q9BQC6 102 aaKnown RBP10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 SLC25A51Q9H1U9 297 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 TNKS2Q9H2K2 1166 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 GULP1Q9UBP9 304 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 BCLAF3A2AJT9 711 aaKnown RBP10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 RCCD1A6NED2 376 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 YJEFN3A6XGL0 299 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 E7ENQ6 273 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 SOD2P04179 222 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 USP4Q13107 963 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 PDGFRLQ15198 375 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CERS6Q6ZMG9 384 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CLEC20AQ6ZU45 233 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 SERINC5Q86VE9 423 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CCDC185Q8N715 623 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 PLD5Q8N7P1 536 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 LRRN4Q8WUT4 740 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 ART4Q93070 314 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 AP2M1Q96CW1 435 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 PRRG3Q9BZD7 231 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CAAP1Q9H8G2 361 aa10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 IMP3Q9NV31 184 aaKnown RBP10.41□□□□□ -0.74
NIPAL3-201ENST00000003912 CDK14O94921 469 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 IFNA16P05015 189 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 H2AFXP16104 143 aaPredicted RBP10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 TPSB2P20231 275 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 PSMA3P25788 255 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 SLC16A1P53985 500 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 ZNF844Q08AG5 666 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 ZNHIT3Q15649 155 aaPredicted RBP10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 TPSAB1Q15661 275 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 SRLQ86TD4 932 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 KCTD14Q9BQ13 255 aaPredicted RBP10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 GBA3Q9H227 469 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 FAM83DQ9H4H8 585 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 BCAS3Q9H6U6 928 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 KLC4Q9NSK0 619 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 DZANK1Q9NVP4 752 aa10.4□□□□□ -0.74
NIPAL3-201ENST00000003912 SCN11AQ9UI33 1791 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms