RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 H2-Q2Q4KN81 360 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fam46cQ5SSF7 391 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Nr2e1Q64104 385 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Larp4bQ6A0A2 741 aaKnown RBP11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr1198Q7TR12 308 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gpr62Q80UC6 358 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zbtb41Q811F1 908 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Pcdhgb1Q91XX8 918 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Pcdhga9Q91XX9 932 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cmc1Q9CPZ8 106 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fam151bD3YUE4 279 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cyp4a14O35728 507 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fzd1O70421 642 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ap2a1P17426 977 aaKnown RBP11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Grid2ipQ0QWG9 1203 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Clec12aQ504P2 267 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 CcncQ62447 283 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fcrl5Q68SN8 596 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 SvoplQ6PDF3 494 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Catsper3Q80W99 395 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 TgdsQ8VDR7 355 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gria4Q9Z2W8 902 aa11.96□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm13941A2AJ38 245 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gjb3P28231 270 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fbxw10Q5SUS0 1030 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Slco2b1Q8BXB6 683 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zfp263Q8CF60 680 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Dok4Q99KE3 325 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fcf1Q9CTH6 198 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Hspa12bQ9CZJ2 685 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Efhc2Q9D485 750 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Rgs17Q9QZB0 210 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 McuQ3UMR5 350 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Xlr3bQ6P205 226 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr1152Q7TR34 310 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr1105Q7TR58 312 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zfp62Q8C827 914 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Adnp2Q8CHC8 1165 aaKnown RBP11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Lrrc56Q8K375 552 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 BsndQ8VIM4 307 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fam32aQ9CR80 112 aaKnown RBP11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Trpc4apQ9JLV2 797 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Katna1Q9WV86 491 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Pex5O09012 639 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Reps1O54916 795 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Vps45P97390 570 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cntn3Q07409 1028 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 DhpsQ3TXU5 369 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ceacam5Q3UKK2 947 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mfsd3Q5U419 412 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Usp1Q8BJQ2 784 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gucy1b2Q8BXH3 824 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cntnap3E9PY62 1287 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm10721J3QPJ9 223 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cd4P06332 457 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gp6P0C191 313 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ptger1P35375 405 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cct8P42932 548 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ak8Q32M07 479 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Pih1d3Q3KNI6 218 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Adora2bQ60614 332 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gpr19Q61121 415 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Eif2b4Q61749 524 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Tnpo3Q6P2B1 923 aaKnown RBP11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Teddm1aQ810U2 305 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Stx16Q8BVI5 326 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Tmco1Q921L3 188 aaKnown RBP11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fam3aQ9D8T0 230 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Angptl2Q9R045 493 aa11.95□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm42688A0A0R3P9D1 673 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Aldh1a7O35945 501 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Igsf9Q05BQ1 1179 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Aldh16a1Q571I9 802 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr1355Q7TQU9 310 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mief1Q8BGV8 463 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Kirrel3Q8BR86 778 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ccdc134Q8C7V8 229 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ccdc142Q8CAI1 738 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Rhobtb1Q9DAK3 695 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 SpnP15702 395 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Slc26a1P58735 704 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Scarf2P59222 833 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mrpl10Q3TBW2 262 aaKnown RBP11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Rnf157Q3TEL6 685 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Crhr2Q60748 411 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Arhgap26Q6ZQ82 814 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gpr141Q7TQP0 305 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ppp1r15bQ8BFW3 697 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Susd6Q8BGE4 302 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ccdc151Q8BSN3 593 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 TbcelQ8C5W3 424 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr665Q8VG79 316 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Def8Q99J78 448 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ssxb1Q9CPU1 170 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zmat2Q9CPW7 199 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Wfdc1Q9ESH5 211 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 AccsA2AIG8 502 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Vmn2r11E9Q4X4 861 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zfr2E9Q5M4 874 aa11.94□□□□□ -0.5
Pcif1-201ENSMUST00000041643 ChkaO54804 453 aa11.94□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms