RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 H6pdQ8CFX1 789 aa17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 Fam193aQ8CGI1 1231 aaKnown RBP17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 Wipf1Q8K1I7 493 aa17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 Ipo11Q8K2V6 975 aa17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 NoboxQ8VIH1 527 aa17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 Aim2Q91VJ1 354 aaKnown RBP17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 Akr1c14Q91WT7 323 aa17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 Camk1Q91YS8 374 aa17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 4930548H24RikQ9D496 437 aa17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 Ttc33Q9D6K7 262 aa17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 Trpv4Q9EPK8 871 aa17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 MkksQ9JI70 570 aa17.11■□□□□ 0.33
Trim54-201ENSMUST00000013771 Klhl32A2AJX0 620 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Gm15091B1AZM2 449 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 ErmardE9Q048 622 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Pja1O55176 578 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 H2afzP0C0S6 128 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Rpl7aP12970 266 aaKnown RBP17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Lmnb2P21619 596 aaKnown RBP17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 HnrnpkP61979 463 aaKnown RBP17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Ncf4P97369 339 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 GiprQ0P543 460 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Prss57Q14B24 284 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Cd300lgQ1ERP8 331 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 H2afvQ3THW5 128 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Ugt3a1Q3UP75 523 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Abl2Q4JIM5 1182 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Prss53Q571E5 552 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Fzd4Q61088 537 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 CilpQ66K08 1184 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Sohlh1Q6IUP1 357 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Dclk2Q6PGN3 756 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Rxfp4Q7TQP4 414 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Ap4e1Q80V94 1122 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Pias2Q8C5D8 621 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Nlrp4bQ8C6J9 863 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Upp2Q8CGR7 320 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Mospd1Q8VEL0 213 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 TardbpQ921F2 414 aaKnown RBP17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Gprc5bQ923Z0 410 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Usp11Q99K46 921 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Rnf135Q9CWS1 417 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Fhl5Q9WTX7 284 aa17.1■□□□□ 0.33
Trim54-201ENSMUST00000013771 Gm15821A6X8J8 139 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Zscan4bE9Q3G0 505 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Susd5G3UW60 619 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Agpat1O35083 285 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 XlrP05531 208 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Slc1a2P43006 572 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Stmn1P54227 149 aaKnown RBP17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Scrn3Q3TMH2 418 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 LbrQ3U9G9 626 aaKnown RBP17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 PighQ5M9N4 188 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Clec18aQ7TSQ1 534 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Camta2Q80Y50 1208 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Fam53cQ8BXQ8 393 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Psapl1Q8C1C1 522 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Slc5a11Q8K0E3 673 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Mmgt1Q8K273 131 aaKnown RBP17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Fam13bQ8K2H3 851 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Vmn1r218Q8R261 298 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Acsl6Q91WC3 697 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Clcc1Q99LI2 539 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Ubxn6Q99PL6 442 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Acp1Q9D358 158 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Dus2Q9D7B1 493 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Rdh14Q9ERI6 334 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Kat2bQ9JHD1 813 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Nup50Q9JIH2 466 aaKnown RBP17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 RhoaQ9QUI0 193 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Il17bQ9QXT6 180 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Unc13cQ8K0T7 2210 aa17.09■□□□□ 0.33
Trim54-201ENSMUST00000013771 Chd3B1AR17 2055 aa17.08■□□□□ 0.33
Trim54-201ENSMUST00000013771 Gm3373A6NAS7 205 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Gm7073E9QAS1 335 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Gpr27O54897 379 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cxcr2P35343 359 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ostf1Q62422 215 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Itga3Q62470 1053 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 TdrkhQ80VL1 560 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Tmem184bQ8BG09 407 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Pknox2Q8BG99 474 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Tarsl2Q8BLY2 790 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Cdcp2Q8BQH6 427 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ak5Q920P5 562 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Ubxn1Q922Y1 297 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 MpstQ99J99 297 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Vkorc1Q9CRC0 161 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 MtrexQ9CZU3 1040 aaKnown RBP17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 DpysQ9EQF5 519 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Mpp6Q9JLB0 553 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Copg1Q9QZE5 874 aa17.08■□□□□ 0.32
Trim54-201ENSMUST00000013771 Btbd18A0A0A6YY25 723 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Vmn2r34E9PVI0 852 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Gm20390E9PZF0 267 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Vmn2r37F8VQD3 802 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Gm4847G3X946 537 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Gm20878L7N244 103 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 Klf6O08584 283 aa17.07■□□□□ 0.32
Trim54-201ENSMUST00000013771 P01810 119 aa17.07■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms