RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 TWF2Q6IBS0 349 aaKnown RBP13.96□□□□□ -0.17
PHGDH-233ENST00000642021 DCLRE1AQ6PJP8 1040 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 NPLOC4Q8TAT6 608 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 RNF34Q969K3 372 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 PAAF1Q9BRP4 392 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 SENP6Q9GZR1 1112 aaPredicted RBP13.96□□□□□ -0.17
PHGDH-233ENST00000642021 TRPV6Q9H1D0 765 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 Q9H521 79 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 MIOSQ9NXC5 875 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 NCKIPSDQ9NZQ3 722 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 PDHXO00330 501 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 F9P00740 461 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 HSPA1AP0DMV8 641 aaKnown RBP13.96□□□□□ -0.17
PHGDH-233ENST00000642021 HSPA1BP0DMV9 641 aaKnown RBP13.96□□□□□ -0.17
PHGDH-233ENST00000642021 EPHX2P34913 555 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 MAGEA8P43361 318 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 ZNF467Q7Z7K2 595 aaPredicted RBP13.96□□□□□ -0.17
PHGDH-233ENST00000642021 AHI1Q8N157 1196 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 DLG3Q92796 817 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 TSGA13Q96PP4 275 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 ABHD16BQ9H3Z7 469 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 ZNF696Q9H7X3 374 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 GLOD4Q9HC38 313 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 TRPC7Q9HCX4 862 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 IGSF5Q9NSI5 407 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 NDUFA13Q9P0J0 144 aa13.96□□□□□ -0.17
PHGDH-233ENST00000642021 AAR2Q9Y312 384 aaKnown RBP13.96□□□□□ -0.17
PHGDH-233ENST00000642021 TRIM38O00635 465 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 NPHS1O60500 1241 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 MAFKO60675 156 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 TRPA1O75762 1119 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 PYGLP06737 847 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 LRP8Q14114 963 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 UGP2Q16851 508 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 GPR142Q7Z601 462 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 LCA5Q86VQ0 697 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 DRAXINQ8NBI3 349 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-233ENST00000642021 LRTOMTQ8WZ04 291 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 FCRL5Q96RD9 977 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 OLFM1Q99784 485 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 MRPL57Q9BQC6 102 aaKnown RBP13.95□□□□□ -0.18
PHGDH-233ENST00000642021 MRPL1Q9BYD6 325 aaKnown RBP13.95□□□□□ -0.18
PHGDH-233ENST00000642021 SLC2A11Q9BYW1 496 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 SLC39A8Q9C0K1 460 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 CCDC167Q9P0B6 97 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 GMPR2Q9P2T1 348 aaKnown RBP13.95□□□□□ -0.18
PHGDH-233ENST00000642021 MTF2Q9Y483 593 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-233ENST00000642021 TCAF1Q9Y4C2 921 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 PCDHGA4Q9Y5G9 962 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 PDCD11Q14690 1871 aaKnown RBP13.95□□□□□ -0.18
PHGDH-233ENST00000642021 PRORSD1PA6NEY8 169 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 CCDC160A6NGH7 325 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 STRNO43815 780 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 TNFAIP8O95379 198 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 MT-CO1P00395 513 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 PAX3P23760 479 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 ADRA1AP35348 466 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 RGS2P41220 211 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 INHBCP55103 352 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 TRIM25Q14258 630 aaKnown RBP13.95□□□□□ -0.18
PHGDH-233ENST00000642021 BTBD8Q5XKL5 378 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 CHSY3Q70JA7 882 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 PIWIL4Q7Z3Z4 852 aaKnown RBP13.95□□□□□ -0.18
PHGDH-233ENST00000642021 ARHGAP22Q7Z5H3 698 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 AMIGO2Q86SJ2 522 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 C2CD4AQ8NCU7 369 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-233ENST00000642021 GRIN3AQ8TCU5 1115 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 DQX1Q8TE96 717 aaKnown RBP13.95□□□□□ -0.18
PHGDH-233ENST00000642021 STON2Q8WXE9 905 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 SLCO4A1Q96BD0 722 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 ASB9Q96DX5 294 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 HIC2Q96JB3 615 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 COQ10BQ9H8M1 238 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 TREX1Q9NSU2 369 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 BCAP29Q9UHQ4 241 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 FBXO5Q9UKT4 447 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 RNF11Q9Y3C5 154 aa13.95□□□□□ -0.18
PHGDH-233ENST00000642021 ZNF189O75820 626 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-233ENST00000642021 FAM58BPP0C7Q3 252 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 NELFEP18615 380 aaKnown RBP13.94□□□□□ -0.18
PHGDH-233ENST00000642021 FGFR3P22607 806 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 ATP5F1P24539 256 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-233ENST00000642021 CCNCP24863 283 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 PGFP49763 221 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 PDAP1Q13442 181 aaKnown RBP13.94□□□□□ -0.18
PHGDH-233ENST00000642021 APOFQ13790 326 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 MFSD10Q14728 455 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 PABPC1LQ4VXU2 614 aaKnown RBP13.94□□□□□ -0.18
PHGDH-233ENST00000642021 ARTNQ5T4W7 220 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 IQSEC1Q6DN90 963 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 CATSPER1Q8NEC5 780 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 OR9I1Q8NGQ6 314 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 EZH1Q92800 747 aaPredicted RBP13.94□□□□□ -0.18
PHGDH-233ENST00000642021 EME1Q96AY2 570 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 PHF21BQ96EK2 531 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 GAD1Q99259 594 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 IL12RB2Q99665 862 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 DDX18Q9NVP1 670 aaKnown RBP13.94□□□□□ -0.18
PHGDH-233ENST00000642021 CACNA2D2Q9NY47 1150 aa13.94□□□□□ -0.18
PHGDH-233ENST00000642021 TRPC5OSA6NMA1 111 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms