RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 LIN28AQ9H9Z2 209 aaKnown RBP16.7■□□□□ 0.26
HNRNPU-228ENST00000640306 PYGLP06737 847 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 KCNE1P15382 129 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 BDNFP23560 247 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 FASTKQ14296 549 aaKnown RBP16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 MTX3Q5HYI7 312 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 SCAMP5Q8TAC9 235 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 GAD1Q99259 594 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 OLFM1Q99784 485 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 TSPYL2Q9H2G4 693 aaPredicted RBP16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 GIMAP2Q9UG22 337 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 AP4S1Q9Y587 144 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 TRIP12Q14669 1992 aaPredicted RBP16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 PRORSD1PA6NEY8 169 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 TRIM38O00635 465 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 MTSS1O43312 755 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 AP1G1O43747 822 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 RGS2P41220 211 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 ARCN1P48444 511 aaKnown RBP16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 SCAPQ12770 1279 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 DENND5AQ6IQ26 1287 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 PPHLN1Q8NEY8 458 aaKnown RBP16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 EMID1Q96A84 441 aaPredicted RBP16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 TMIGD2Q96BF3 282 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 SLC45A3Q96JT2 553 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 SLC29A1Q99808 456 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 BRD8Q9H0E9 1235 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 CAAP1Q9H8G2 361 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 MPP6Q9NZW5 540 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 SFMBT1Q9UHJ3 866 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 FBXO5Q9UKT4 447 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 FBP2O00757 339 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 TADA2AO75478 443 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 GPC4O75487 556 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 ASLP04424 464 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 CKMT2P17540 419 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 PSMC3P17980 439 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 CD151P48509 253 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 CSRP3P50461 194 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 USP46P62068 366 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 BEX3Q00994 111 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 LIMS2Q7Z4I7 341 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 SPPL2BQ8TCT7 592 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 DIS3LQ8TF46 1054 aaKnown RBP16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 NOL11Q9H8H0 719 aaKnown RBP16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 NMRK2Q9NPI5 230 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 EPS15L1Q9UBC2 864 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 BCAP29Q9UHQ4 241 aa16.69■□□□□ 0.26
HNRNPU-228ENST00000640306 RRN3P2A6NIE6 340 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 SLCO1B7G3V0H7 640 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 PDHXO00330 501 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 CCDC166P0CW27 439 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 CPB1P15086 417 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 MAXP61244 160 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 REP15Q6BDI9 236 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 B3GNT6Q6ZMB0 384 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 SH3RF2Q8TEC5 729 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 TRIM8Q9BZR9 551 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 SENP6Q9GZR1 1112 aaPredicted RBP16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 CNGB3Q9NQW8 809 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 RBM22Q9NW64 420 aaKnown RBP eCLIP16.68■□□□□ 0.262e-9■■■■□ 25.1
HNRNPU-228ENST00000640306 ARHGEF38Q9NXL2 777 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 PTGDR2Q9Y5Y4 395 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 ZNF839A8K0R7 811 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 PSMD12O00232 456 aaPredicted RBP16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 GABRDO14764 452 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 UBDO15205 165 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 CELF2O95319 508 aaKnown RBP16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 HLA-DQB2P05538 268 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 ZNF26P17031 533 aaPredicted RBP16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 PGFP49763 221 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 CDH13P55290 713 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 PRAMEP78395 509 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 LINC00523Q86TU6 105 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 RYBPQ8N488 228 aaPredicted RBP16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 MAML3Q96JK9 1138 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 VAT1Q99536 393 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 MRPS26Q9BYN8 205 aaKnown RBP16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 SLC39A8Q9C0K1 460 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 GLOD4Q9HC38 313 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 CACNA2D2Q9NY47 1150 aa16.68■□□□□ 0.26
HNRNPU-228ENST00000640306 TPST1O60507 370 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 TIPRLO75663 272 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 HADHAP40939 763 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 CXCR3P49682 368 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 ITKQ08881 620 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 TRIM25Q14258 630 aaKnown RBP16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 UGP2Q16851 508 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 BTBD8Q5XKL5 378 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 BHLHA9Q7RTU4 235 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 CUZD1Q86UP6 607 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 HERC6Q8IVU3 1022 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 DQX1Q8TE96 717 aaKnown RBP16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 ANKRD49Q8WVL7 239 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 LRCH3Q96II8 777 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 MIOSQ9NXC5 875 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 NSMCE4AQ9NXX6 385 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 AAR2Q9Y312 384 aaKnown RBP16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 RNF11Q9Y3C5 154 aa16.67■□□□□ 0.26
HNRNPU-228ENST00000640306 TCAF1Q9Y4C2 921 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms