RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 E9PBE3 544 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 KLHL41O60662 606 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 CCDC166P0CW27 439 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 RAB10P61026 200 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 DAB2P98082 770 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 PURAQ00577 322 aaKnown RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 RFTN1Q14699 578 aaPredicted RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 NOMO1Q15155 1222 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 FAM98BQ52LJ0 330 aaKnown RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 NPNTQ6UXI9 565 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 WDR48Q8TAF3 677 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 ZNF398Q8TD17 642 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 BTN2A2Q8WVV5 523 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 CLP1Q92989 425 aaKnown RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 NSMCE2Q96MF7 247 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 SPATA5L1Q9BVQ7 753 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 ZNF232Q9UNY5 417 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 ASF1AQ9Y294 204 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 CCDC154A6NI56 674 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 ISM1B1AKI9 464 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 HMGB3O15347 200 aaKnown RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 USP1O94782 785 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 SEC24DO94855 1032 aaPredicted RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 CCT8P50990 548 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 DAOAP59103 153 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 PTP4A2Q12974 167 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 CYTH1Q15438 398 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 ALG11Q2TAA5 492 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 IL27RAQ6UWB1 636 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 ANKS1BQ7Z6G8 1248 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 SCLYQ96I15 445 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 LGMNQ99538 433 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 HEPHQ9BQS7 1158 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 SLC28A1O00337 649 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 NRP1O14786 923 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 SCAMP3O14828 347 aaKnown RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 CD3EAPO15446 510 aaKnown RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 ULK1O75385 1050 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 TPSB2P20231 275 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 RPL14P50914 215 aaKnown RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 SLC16A1P53985 500 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 TPSAB1Q15661 275 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 R3HCC1LQ7Z5L2 792 aaKnown RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 KCNV2Q8TDN2 545 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 KCTD14Q9BQ13 255 aaPredicted RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 TRMOQ9BU70 441 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 AGO3Q9H9G7 860 aaKnown RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 COQ4Q9Y3A0 265 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 PER2O15055 1255 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 ZNF682O95780 498 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 TNFRSF8P28908 595 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 BLKP51451 505 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 ILF3Q12906 894 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 USP4Q13107 963 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 TIGD5Q53EQ6 642 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 SRFBP1Q8NEF9 429 aaKnown RBP11.1□□□□□ -0.63
SCN1B-208ENST00000640135 NPLOC4Q8TAT6 608 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 HERVK_113Q902F9 699 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 ACDQ96AP0 544 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 ZFYVE19Q96K21 471 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 CORO2BQ9UQ03 480 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 COLEC10Q9Y6Z7 277 aa11.1□□□□□ -0.63
SCN1B-208ENST00000640135 PFDN1O60925 122 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 ATG13O75143 517 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 FKBP6O75344 327 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 ERN1O75460 977 aaKnown RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 RNASEH2AO75792 299 aaKnown RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 ACRP10323 421 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 COX7A2P14406 83 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 SP100P23497 879 aaPredicted RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 MC4RP32245 332 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 S100A5P33763 92 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 SPAM1P38567 509 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 COPZ1P61923 177 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 PLIN5Q00G26 463 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 HNRNPDQ14103 355 aaKnown RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 CBX2Q14781 532 aaPredicted RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 PDE12Q6L8Q7 609 aaKnown RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 RNF168Q8IYW5 571 aaPredicted RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 JOSD2Q8TAC2 188 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 GFM2Q969S9 779 aaKnown RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 SLC25A51Q9H1U9 297 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 TMPRSS4Q9NRS4 437 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 PIH1D1Q9NWS0 290 aaKnown RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 FNIP2Q9P278 1114 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 KLQ9UEF7 1012 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 CORO1CQ9ULV4 474 aaPredicted RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 CICQ96RK0 1608 aaPredicted RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 PRMT3O60678 531 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 AVILO75366 819 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 EPN2O95208 641 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 GSTM1P09488 218 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 ALPPL2P10696 532 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 H2AFXP16104 143 aaPredicted RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 ZNF23P17027 643 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 PEX19P40855 299 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 IL10RBQ08334 325 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 FASTKQ14296 549 aaKnown RBP11.09□□□□□ -0.63
SCN1B-208ENST00000640135 PFKFB4Q16877 469 aa11.09□□□□□ -0.63
SCN1B-208ENST00000640135 AAK1Q2M2I8 961 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms