RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	UPF3A	Q9H1J1	476 aa	Known RBP	7.82	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SUDS3	Q9H7L9	328 aa	Predicted RBP	7.82	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SEPT3	Q9UH03	358 aa		7.82	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SUN2	Q9UH99	717 aa		7.82	□□□□□ -1.16
HNRNPU-223	ENST00000640001	DNMT3L	Q9UJW3	386 aa		7.82	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SORCS3	Q9UPU3	1222 aa		7.82	□□□□□ -1.16
HNRNPU-223	ENST00000640001		A0A087X1B8	175 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ATP6AP2	A0A1C7CYW4	349 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TMEM114	B3SHH9	223 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PEX11A	O75192	247 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ATP6AP2	O75787	350 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	WFS1	O76024	890 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	EOMES	O95936	686 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	AHSG	P02765	367 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	INHA	P05111	366 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PYGL	P06737	847 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	DHRS4L1	P0CG22	281 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	FGF3	P11487	239 aa	Predicted RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MSX2	P35548	267 aa	Predicted RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CLCN5	P51795	746 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CDH13	P55290	713 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	NIPAL4	Q0D2K0	466 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TSTA3	Q13630	321 aa	Predicted RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	DEFB115	Q30KQ5	88 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	XKR4	Q5GH76	650 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	HECTD3	Q5T447	861 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TMCO4	Q5TGY1	634 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	STEAP4	Q687X5	459 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	FBXL22	Q6P050	247 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ANKS3	Q6ZW76	656 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	GALNT4	Q8N4A0	578 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CNTD1	Q8N815	330 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ICA1L	Q8NDH6	482 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SPPL2B	Q8TCT7	592 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SKA1	Q96BD8	255 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MRPL9	Q9BYD2	267 aa	Known RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ANLN	Q9NQW6	1124 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RNF186	Q9NXI6	227 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	HACD3	Q9P035	362 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CCDC167	Q9P0B6	97 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TRMT6	Q9UJA5	497 aa	Known RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PCDHB12	Q9Y5F1	795 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CLGN	O14967	610 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ANGPT2	O15123	496 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	UBD	O15205	165 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ATP5B	P06576	529 aa	Known RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CCR10	P46092	362 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TUFM	P49411	452 aa	Known RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PSEN1	P49768	467 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ADAM17	P78536	824 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	KLF10	Q13118	480 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	HNRNPD	Q14103	355 aa	Known RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PFKFB4	Q16877	469 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ALF	Q53S48	1182 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ACSBG2	Q5FVE4	666 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RALGPS1	Q5JS13	557 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PTRHD1	Q6GMV3	140 aa	Known RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ZC3HC1	Q86WB0	502 aa	Known RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TTC9B	Q8N6N2	239 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CCDC97	Q96F63	343 aa	Predicted RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SCLY	Q96I15	445 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MRPL57	Q9BQC6	102 aa	Known RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	EFHD1	Q9BUP0	239 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CCSER2	Q9H7U1	834 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	BPIFA1	Q9NP55	256 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	BATF3	Q9NR55	127 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	VTI1B	Q9UEU0	232 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ATP11B	Q9Y2G3	1177 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	VWA7	Q9Y334	891 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PKP3	Q9Y446	797 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SCN1A	P35498	2009 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	KIF3C	O14782	793 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PRKCG	P05129	697 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ZCCHC18	P0CG32	403 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	T-ENOL	P0DO92	83 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	HSPA8	P11142	646 aa	Known RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	MYL4	P12829	197 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ITGB6	P18564	788 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TACR2	P21452	398 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	XPA	P23025	273 aa	Predicted RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PPARG	P37231	505 aa	Predicted RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	POU4F1	Q01851	419 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RAD51	Q06609	339 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	ZYG11A	Q6WRX3	759 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	PNPLA1	Q8N8W4	532 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CEP70	Q8NHQ1	597 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	DDI1	Q8WTU0	396 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	APOL5	Q9BWW9	433 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	CATSPERZ	Q9NTU4	200 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	LNPEP	Q9UIQ6	1025 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	LSM7	Q9UK45	103 aa	Known RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TLR6	Q9Y2C9	796 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	USP3	Q9Y6I4	520 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	WASF2	Q9Y6W5	498 aa		7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001	RBBP6	Q7Z6E9	1792 aa	Known RBP	7.81	□□□□□ -1.16
HNRNPU-223	ENST00000640001		A8MX80	341 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	SYN3	O14994	580 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	UROD	P06132	367 aa		7.8	□□□□□ -1.16
HNRNPU-223	ENST00000640001	TPBGL	P0DKB5	382 aa		7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms