RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 IQSEC1Q6DN90 963 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 IYDQ6PHW0 289 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 SPATA6LQ8N4H0 392 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 HEXDCQ8WVB3 486 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 EME1Q96AY2 570 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 CCDC126Q96EE4 140 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 ABHD16BQ9H3Z7 469 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 GLOD4Q9HC38 313 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 TMEM30AQ9NV96 361 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 SARDHQ9UL12 918 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 DICER1Q9UPY3 1922 aaKnown RBP20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 ARHGAP10A1A4S6 786 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 MT-CYBP00156 380 aaPredicted RBP20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 SLC12A2P55011 1212 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 GEMP55040 296 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 NR1H2P55055 460 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 IL23RQ5VWK5 629 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 CNSTQ6PJW8 725 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 ATPAF2Q8N5M1 289 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 FAM156AQ8NDB6 213 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 SPPL2BQ8TCT7 592 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 FICDQ9BVA6 458 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 OSBPL2Q9H1P3 480 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 SUDS3Q9H7L9 328 aaPredicted RBP20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 AP4S1Q9Y587 144 aa20.31■□□□□ 0.84
SYNGAP1-227ENST00000638142 MYBPHLA2RUH7 354 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 HHLA1C9JL84 531 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 DFFAO00273 331 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 PSMC3P17980 439 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 CYP2C18P33260 490 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 MYLK3Q32MK0 819 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 MGAT5BQ3V5L5 792 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 KIAA0930Q6ICG6 404 aaPredicted RBP20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 CTU1Q7Z7A3 348 aaKnown RBP20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 ZFP28Q8NHY6 868 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 IRGQQ8WZA9 623 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 ITFG2Q969R8 447 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 ATP6V1E2Q96A05 226 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 IL12RB2Q99665 862 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 MEAF6Q9HAF1 191 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 EML4Q9HC35 981 aaKnown RBP20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 ENTPD7Q9NQZ7 604 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 CIDEBQ9UHD4 219 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 CCDC160A6NGH7 325 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 RHDQ02161 417 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 TRAP1Q12931 704 aaKnown RBP20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 PDAP1Q13442 181 aaKnown RBP20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 ZNF470Q6ECI4 717 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 ISLR2Q6UXK2 745 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 DPP9Q86TI2 863 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 TAC4Q86UU9 113 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 RIN3Q8TB24 985 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 PPP1R13LQ8WUF5 828 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 SENP6Q9GZR1 1112 aaPredicted RBP20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 PREBQ9HCU5 417 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 TREX1Q9NSU2 369 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 CACNA2D2Q9NY47 1150 aa20.3■□□□□ 0.84
SYNGAP1-227ENST00000638142 E7ENX8 843 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 ADRA1AP35348 466 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 USP46P62068 366 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 LRP8Q14114 963 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 FAM83EQ2M2I3 478 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 RWDD4Q6NW29 188 aaKnown RBP20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 ARHGAP36Q6ZRI8 547 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 KIAA0408Q6ZU52 694 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 CHERPQ8IWX8 916 aaKnown RBP20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 PCDH20Q8N6Y1 951 aaKnown RBP20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 RNF34Q969K3 372 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 SGF29Q96ES7 293 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 SMARCD1Q96GM5 515 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 MAML3Q96JK9 1138 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 ZNF597Q96LX8 424 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 UNKQ9C0B0 810 aaKnown RBP20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 TSPYL2Q9H2G4 693 aaPredicted RBP20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 TRPC7Q9HCX4 862 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 IGSF5Q9NSI5 407 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 THEGQ9P2T0 379 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 FBXO5Q9UKT4 447 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 HEATR9A2RTY3 570 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 TRIM24O15164 1050 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 HNRNPLP14866 589 aaKnown RBP eCLIP20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 CPB1P15086 417 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 GJA5P36382 358 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 FASTKQ14296 549 aaKnown RBP20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 TECRLQ5HYJ1 363 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 ARHGAP12Q8IWW6 846 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 LZICQ8WZA0 190 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 PRKD2Q9BZL6 878 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 GALNT8Q9NY28 637 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 SLC2A6Q9UGQ3 507 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 NEU3Q9UQ49 428 aa20.29■□□□□ 0.84
SYNGAP1-227ENST00000638142 PSMD12O00232 456 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-227ENST00000638142 UBDO15205 165 aa20.28■□□□□ 0.84
SYNGAP1-227ENST00000638142 IGFBP6P24592 240 aaPredicted RBP20.28■□□□□ 0.84
SYNGAP1-227ENST00000638142 ADAM17P78536 824 aa20.28■□□□□ 0.84
SYNGAP1-227ENST00000638142 TXNL4AP83876 142 aaKnown RBP20.28■□□□□ 0.84
SYNGAP1-227ENST00000638142 PFKPQ01813 784 aa20.28■□□□□ 0.84
SYNGAP1-227ENST00000638142 REP15Q6BDI9 236 aa20.28■□□□□ 0.84
SYNGAP1-227ENST00000638142 HMGCLL1Q8TB92 370 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms