RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ARMC3Q5W041 872 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 EPGNQ6UW88 154 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 KIAA0408Q6ZU52 694 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 LGI2Q8N0V4 545 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 KCNV2Q8TDN2 545 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 WDR60Q8WVS4 1066 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 TADA1Q96BN2 335 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 ILKAPQ9H0C8 392 aaPredicted RBP21.71■■□□□ 1.07
CLN6-224ENST00000638076 DCLRE1BQ9H816 532 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 MCM8Q9UJA3 840 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 PLA2G4CQ9UP65 541 aa21.71■■□□□ 1.07
CLN6-224ENST00000638076 MAGEC1O60732 1142 aa21.7■■□□□ 1.06
CLN6-224ENST00000638076 GNAZP19086 355 aa21.7■■□□□ 1.06
CLN6-224ENST00000638076 KPNA1P52294 538 aaPredicted RBP21.7■■□□□ 1.06
CLN6-224ENST00000638076 SLC12A2P55011 1212 aa21.7■■□□□ 1.06
CLN6-224ENST00000638076 YBEYP58557 167 aaPredicted RBP21.7■■□□□ 1.06
CLN6-224ENST00000638076 POU4F1Q01851 419 aa21.7■■□□□ 1.06
CLN6-224ENST00000638076 SLC9B1Q4ZJI4 515 aa21.7■■□□□ 1.06
CLN6-224ENST00000638076 RBM20Q5T481 1227 aaKnown RBP21.7■■□□□ 1.06
CLN6-224ENST00000638076 CFAP52Q8N1V2 620 aa21.7■■□□□ 1.06
CLN6-224ENST00000638076 CALML6Q8TD86 181 aa21.7■■□□□ 1.06
CLN6-224ENST00000638076 FAM161BQ96MY7 647 aa21.7■■□□□ 1.06
CLN6-224ENST00000638076 OMDQ99983 421 aa21.7■■□□□ 1.06
CLN6-224ENST00000638076 DRC3Q9H069 523 aa21.7■■□□□ 1.06
CLN6-224ENST00000638076 MAN1C1Q9NR34 630 aa21.7■■□□□ 1.06
CLN6-224ENST00000638076 F5H5T6 163 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 LMNAP02545 664 aaKnown RBP21.69■■□□□ 1.06
CLN6-224ENST00000638076 NCF2P19878 526 aaPredicted RBP21.69■■□□□ 1.06
CLN6-224ENST00000638076 CCR10P46092 362 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 NAGLUP54802 743 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 DNAL1Q4LDG9 190 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 ACSBG2Q5FVE4 666 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 MAPK15Q8TD08 544 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 NDNQ99608 321 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 SEMA3CQ99985 751 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 C1orf21Q9H246 121 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 DLX3O60479 287 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 PQBP1O60828 265 aaKnown RBP21.69■■□□□ 1.06
CLN6-224ENST00000638076 PAPSS2O95340 614 aaPredicted RBP21.69■■□□□ 1.06
CLN6-224ENST00000638076 RPL17P18621 184 aaKnown RBP21.69■■□□□ 1.06
CLN6-224ENST00000638076 MPSTP25325 297 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 RAP1GDS1P52306 607 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 PRKAA2P54646 552 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 PTAR1Q7Z6K3 402 aaPredicted RBP21.69■■□□□ 1.06
CLN6-224ENST00000638076 POU5F2Q8N7G0 328 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 TTLL2Q9BWV7 592 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 POLR1EQ9GZS1 481 aaKnown RBP21.69■■□□□ 1.06
CLN6-224ENST00000638076 DNMT3LQ9UJW3 386 aa21.69■■□□□ 1.06
CLN6-224ENST00000638076 A0A087X1B8 175 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 LOC285095A0A1B0GVY8 99 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 MROH6A6NGR9 719 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 MEI4A8MW99 385 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 MUSKO15146 869 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 PRAMEF11O60813 436 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 RPSAP08865 295 aaKnown RBP21.68■■□□□ 1.06
CLN6-224ENST00000638076 ATXN1LP0C7T5 689 aaKnown RBP21.68■■□□□ 1.06
CLN6-224ENST00000638076 SLC6A4P31645 630 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 ATP5C1P36542 298 aaKnown RBP21.68■■□□□ 1.06
CLN6-224ENST00000638076 LEPRP48357 1165 aaKnown RBP21.68■■□□□ 1.06
CLN6-224ENST00000638076 TMCO4Q5TGY1 634 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 PNPLA1Q8N8W4 532 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 GABPB2Q8TAK5 448 aaPredicted RBP21.68■■□□□ 1.06
CLN6-224ENST00000638076 SEZ6LQ9BYH1 1024 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 RAP2CQ9Y3L5 183 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 CCL22O00626 93 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 MYCP01106 439 aaPredicted RBP21.68■■□□□ 1.06
CLN6-224ENST00000638076 CCNG1P51959 295 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 ZNF235Q14590 738 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 TSNAXIP1Q2TAA8 658 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 ARL13AQ5H913 290 aaPredicted RBP21.68■■□□□ 1.06
CLN6-224ENST00000638076 TMC7Q7Z402 723 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 SCUBE1Q8IWY4 988 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 LRRC43Q8N309 656 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 HEXDCQ8WVB3 486 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 THTPAQ9BU02 230 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 NACA2Q9H009 215 aa21.68■■□□□ 1.06
CLN6-224ENST00000638076 A0A0D9SEW6 157 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 TM7SF2O76062 418 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 PIGNO95427 931 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 RPL14P50914 215 aaKnown RBP21.67■■□□□ 1.06
CLN6-224ENST00000638076 CCL23P55773 120 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 MTA1Q13330 715 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 OR6P1Q8NGX9 317 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 CLPTM1LQ96KA5 538 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 ZNF512Q96ME7 567 aaPredicted RBP21.67■■□□□ 1.06
CLN6-224ENST00000638076 OLFM1Q99784 485 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 MRPL46Q9H2W6 279 aaKnown RBP21.67■■□□□ 1.06
CLN6-224ENST00000638076 E9PBE3 544 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 ACSL4O60488 711 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 KLHL41O60662 606 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 OR1D2P34982 312 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 ARSDP51689 593 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 CILP2Q8IUL8 1156 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 HDAC10Q969S8 669 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 IFT43Q96FT9 208 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 CDK5RAP1Q96SZ6 601 aaKnown RBP21.67■■□□□ 1.06
CLN6-224ENST00000638076 PDFQ9HBH1 243 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 KCTD3Q9Y597 815 aa21.67■■□□□ 1.06
CLN6-224ENST00000638076 MATN2O00339 956 aa21.66■■□□□ 1.06
CLN6-224ENST00000638076 SLC7A4O43246 635 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms