RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	GPR142	Q7Z601	462 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	TFAP2D	Q7Z6R9	452 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	ADAMTSL2	Q86TH1	951 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	NATD1	Q8N6N6	113 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	GRPEL2	Q8TAA5	225 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	BRI3BP	Q8WY22	251 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	PEX13	Q92968	403 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	PGBD4	Q96DM1	585 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	MS4A4A	Q96JQ5	239 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	KLHL32	Q96NJ5	620 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	FAM118B	Q9BPY3	351 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	B3GNT4	Q9C0J1	378 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	TRPV6	Q9H1D0	765 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	NPAP1	Q9NZP6	1156 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	ENPP5	Q9UJA9	477 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	ST14	Q9Y5Y6	855 aa		10.88	□□□□□ -0.67
CHD2-223	ENST00000636306	FAM170A	A1A519	330 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306		H3BRB1	525 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	AP3B1	O00203	1094 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	NELFE	P18615	380 aa	Known RBP	10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	CD58	P19256	250 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	NR4A1	P22736	598 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	PIK3R1	P27986	724 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	HARS2	P49590	506 aa	Known RBP	10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	RHD	Q02161	417 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	NIPAL4	Q0D2K0	466 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	PIGH	Q14442	188 aa	Predicted RBP	10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	STIL	Q15468	1287 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	GRIK4	Q16099	956 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	SEZ6	Q53EL9	994 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	DCUN1D2	Q6PH85	259 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	ABRAXAS1	Q6UWZ7	409 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	ZBTB49	Q6ZSB9	765 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	MAVS	Q7Z434	540 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	HERC6	Q8IVU3	1022 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	PHTF2	Q8N3S3	785 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	SLC4A11	Q8NBS3	891 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	SLC35B2	Q8TB61	432 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	EVPL	Q92817	2033 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	VPS33A	Q96AX1	596 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	BTN2A3P	Q96KV6	586 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	SLITRK1	Q96PX8	696 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	CDK5RAP1	Q96SZ6	601 aa	Known RBP	10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	SLC29A1	Q99808	456 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	BCO2	Q9BYV7	579 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	NAA50	Q9GZZ1	169 aa	Known RBP	10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	LHX5	Q9H2C1	402 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	RNPEP	Q9H4A4	650 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	PCDH12	Q9NPG4	1184 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	IL20	Q9NYY1	176 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	UBA2	Q9UBT2	640 aa	Predicted RBP	10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	DERA	Q9Y315	318 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306	SPEF1	Q9Y4P9	236 aa		10.87	□□□□□ -0.67
CHD2-223	ENST00000636306		A0A087WZ62	844 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	SGK1	O00141	431 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	AIM2	O14862	343 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	SNPH	O15079	494 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	POLR1C	O15160	346 aa	Predicted RBP	10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	DNAJB5	O75953	348 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	KRT8	P05787	483 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	GSN	P06396	782 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	MMP3	P08254	477 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	KRT19	P08727	400 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	STAG3L1	P0CL83	205 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	HSPA1A	P0DMV8	641 aa	Known RBP	10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	HSPA1B	P0DMV9	641 aa	Known RBP	10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	CXCL8	P10145	99 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	FGF3	P11487	239 aa	Predicted RBP	10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	GLDC	P23378	1020 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	IL32	P24001	234 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	CNTF	P26441	200 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	ADCYAP1R1	P41586	468 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	NR4A2	P43354	598 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	ASPA	P45381	313 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	TAS2R40	P59535	323 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	TRIM32	Q13049	653 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	MAMLD1	Q13495	774 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	TMEM132D	Q14C87	1099 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	DUSP7	Q16829	419 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	PGS1	Q32NB8	556 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	SPRYD7	Q5W111	196 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	EEF1DP3	Q658K8	133 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	ZNF773	Q6PK81	442 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	EPGN	Q6UW88	154 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	CAMK1D	Q8IU85	385 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306		Q8N9G6	341 aa	Predicted RBP	10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	ASB9	Q96DX5	294 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	CFAP36	Q96G28	342 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	VPS35	Q96QK1	796 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	COQ7	Q99807	217 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	CLSTN3	Q9BQT9	956 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	FDXACB1	Q9BRP7	624 aa	Predicted RBP	10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	TINF2	Q9BSI4	451 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	EMILIN2	Q9BXX0	1053 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	KATNBL1	Q9H079	304 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	SLA2	Q9H6Q3	261 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	FBXO8	Q9NRD0	319 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	PKD2L2	Q9NZM6	624 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	MOSPD1	Q9UJG1	213 aa		10.86	□□□□□ -0.67
CHD2-223	ENST00000636306	KIAA1257	Q9ULG3	409 aa		10.86	□□□□□ -0.67

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