RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 NYAP1Q6ZVC0 841 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 TMEM110Q86TL2 294 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 PIM3Q86V86 326 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 SIK2Q9H0K1 926 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 ZDHHC6Q9H6R6 413 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 RDH14Q9HBH5 336 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 FOXD4L1Q9NU39 408 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 B3GALT1Q9Y5Z6 326 aa18.39■□□□□ 0.53
CLN6-212ENST00000636020 A1L4Q6 167 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 TMEM110-MUSTN1A8MSY1 372 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 B4GAT1O43505 415 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 MMP20O60882 483 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 VPS4BO75351 444 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 ZMPSTE24O75844 475 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 TM7SF2O76062 418 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 CPNE6O95741 557 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 MYL1P05976 194 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 PRKAR1AP10644 381 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 SRP54P61011 504 aaKnown RBP18.38■□□□□ 0.53
CLN6-212ENST00000636020 CDC20Q12834 499 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 ARHGEF7Q14155 803 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 HLTFQ14527 1009 aaKnown RBP eCLIP18.38■□□□□ 0.53
CLN6-212ENST00000636020 MAP9Q49MG5 647 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 ZNF805Q5CZA5 627 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 DCAF17Q5H9S7 520 aaPredicted RBP18.38■□□□□ 0.53
CLN6-212ENST00000636020 RETSATQ6NUM9 610 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 DENND1BQ6P3S1 775 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 ENPP7Q6UWV6 458 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 TICAM1Q8IUC6 712 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 SFTPA2Q8IWL1 248 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 ZNF683Q8IZ20 524 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 DEFB106AQ8N104 65 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 GALNT11Q8NCW6 608 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 OR7D4Q8NG98 312 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 VOPP1Q96AW1 172 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 ARHGEF26Q96DR7 871 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 SLC2A13Q96QE2 648 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 RBM15Q96T37 977 aaKnown RBP eCLIP18.38■□□□□ 0.53
CLN6-212ENST00000636020 C1QTNF7Q9BXJ2 289 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 HECAQ9UBI9 543 aaPredicted RBP18.38■□□□□ 0.53
CLN6-212ENST00000636020 VPS4AQ9UN37 437 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 TP53TG5Q9Y2B4 290 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 POLQO75417 2590 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 CSMD1Q96PZ7 3565 aa18.38■□□□□ 0.53
CLN6-212ENST00000636020 ESPL1Q14674 2120 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 CETN3O15182 167 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 NUDT21O43809 227 aaKnown RBP18.37■□□□□ 0.53
CLN6-212ENST00000636020 RAD1O60671 282 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 SEMA7AO75326 666 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 ADCY5O95622 1261 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 GKP32189 559 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 IRF4Q15306 451 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 ARHGAP44Q17R89 818 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 DEFB109BQ30KR1 87 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 C14orf28Q4W4Y0 310 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 PLPP6Q8IY26 295 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 TEX19Q8NA77 164 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 RCBTB1Q8NDN9 531 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 KAT5Q92993 513 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 CUEDC1Q9NWM3 386 aaPredicted RBP18.37■□□□□ 0.53
CLN6-212ENST00000636020 FCF1Q9Y324 198 aaKnown RBP18.37■□□□□ 0.53
CLN6-212ENST00000636020 LRP4O75096 1905 aa18.37■□□□□ 0.53
CLN6-212ENST00000636020 DRGXA6NNA5 263 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 K7EM74 188 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 PRKCGP05129 697 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 NR1D1P20393 614 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 COL8A1P27658 744 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 OAS2P29728 719 aaKnown RBP18.36■□□□□ 0.53
CLN6-212ENST00000636020 DCTP40126 519 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 ME1P48163 572 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 NFATC4Q14934 902 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 KLHL40Q2TBA0 621 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 KCTD16Q68DU8 428 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 FAM46DQ8NEK8 389 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 SPON2Q9BUD6 331 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 DDA1Q9BW61 102 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 TM6SF2Q9BZW4 377 aa18.36■□□□□ 0.53
CLN6-212ENST00000636020 IGHV5-10-1A0A0J9YXX1 117 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 TNFP01375 233 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 HTR1BP28222 390 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 TNFRSF8P28908 595 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 ARF5P84085 180 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 NME3Q13232 169 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 SEPT6Q14141 434 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 TFAP2DQ7Z6R9 452 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 HEATR4Q86WZ0 1026 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 OR6K2Q8NGY2 324 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 ART4Q93070 314 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 CCDC47Q96A33 483 aaKnown RBP18.35■□□□□ 0.53
CLN6-212ENST00000636020 ISG20Q96AZ6 181 aaKnown RBP18.35■□□□□ 0.53
CLN6-212ENST00000636020 NT5C1BQ96P26 610 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 HAPLN3Q96S86 360 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 NUDT22Q9BRQ3 303 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 GPN2Q9H9Y4 310 aaPredicted RBP18.35■□□□□ 0.53
CLN6-212ENST00000636020 ANLNQ9NQW6 1124 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 MPP6Q9NZW5 540 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 KLQ9UEF7 1012 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 PILRAQ9UKJ1 303 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 ACTL7AQ9Y615 435 aa18.35■□□□□ 0.53
CLN6-212ENST00000636020 DGKBQ9Y6T7 804 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms