RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 CCNG2Q16589 344 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 EOGTQ5NDL2 527 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 ANKRD22Q5VYY1 191 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 SDE2Q6IQ49 451 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 NUDT18Q6ZVK8 323 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 SRLQ86TD4 932 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 HDDC3Q8N4P3 179 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 SPATA4Q8NEY3 305 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 OR2T3Q8NH03 318 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 NAT14Q8WUY8 206 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 EID2BQ96D98 161 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 SCUBE2Q9NQ36 999 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 FSCN3Q9NQT6 498 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 FBXL12Q9NXK8 326 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 NEU2Q9Y3R4 380 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 PLXNA2O75051 1894 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 BCLAF3A2AJT9 711 aaKnown RBP8.61□□□□□ -1.03
CDKL5-209ENST00000635828 NCAM2O15394 837 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 GPR39O43194 453 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 LAMTOR5O43504 91 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 AVILO75366 819 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 SLC4A1P02730 911 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 RENBPP51606 427 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 AGBL4Q5VU57 503 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 TMEFF1Q8IYR6 380 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 SLC25A41Q8N5S1 370 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 ETNK1Q9HBU6 452 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 FZD3Q9NPG1 666 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 RRAGDQ9NQL2 400 aaPredicted RBP8.61□□□□□ -1.03
CDKL5-209ENST00000635828 TMEM51Q9NW97 253 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 SEPT3Q9UH03 358 aa8.61□□□□□ -1.03
CDKL5-209ENST00000635828 C16orf96A6NNT2 1141 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 GOLGA8MH3BSY2 632 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 BANF1O75531 89 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 F7P08709 466 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 PRLRP16471 622 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 TPH1P17752 444 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 PTGER3P43115 390 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 PIP5KL1Q5T9C9 394 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 SEL1L3Q68CR1 1132 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 GSTA5Q7RTV2 222 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 SYNPOQ8N3V7 929 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 PCDH20Q8N6Y1 951 aaKnown RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 PDCD7Q8N8D1 485 aaKnown RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 IPMKQ8NFU5 416 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 NKD2Q969F2 451 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 MRGPRX2Q96LB1 330 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 HEPHQ9BQS7 1158 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 WRAP53Q9BUR4 548 aaKnown RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 C6orf106Q9H6K1 298 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 GLOD4Q9HC38 313 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 PRMT8Q9NR22 394 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 RAI2Q9Y5P3 530 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 ATXN2Q99700 1313 aaKnown RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 ESYT3A0FGR9 886 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 TP73O15350 636 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 SP9P0CG40 484 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 PTGIRP43119 386 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 SNRPD1P62314 119 aaKnown RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 CRADDP78560 199 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 STARD3Q14849 445 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 PREPLQ4J6C6 727 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 GDPD4Q6W3E5 623 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 RASSF3Q86WH2 238 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 SPNS2Q8IVW8 549 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 GANCQ8TET4 914 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 PRCCQ92733 491 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 IMP4Q96G21 291 aaKnown RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 GDAP1L1Q96MZ0 367 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 POLR1EQ9GZS1 481 aaKnown RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 SMOC1Q9H4F8 434 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 RSPH14Q9UHP6 348 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 SHOC2Q9UQ13 582 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 ADAMTS9Q9P2N4 1935 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 CCL22O00626 93 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 LHCGRP22888 699 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 XRCC4Q13426 336 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 TIGD7Q6NT04 549 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 TTC7BQ86TV6 843 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 ZNF557Q8N988 423 aaPredicted RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 OR8D1Q8WZ84 308 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 TOE1Q96GM8 510 aaKnown RBP8.6□□□□□ -1.03
CDKL5-209ENST00000635828 NUDCD1Q96RS6 583 aa8.6□□□□□ -1.03
CDKL5-209ENST00000635828 NPIPB15A6NHN6 443 aaPredicted RBP8.59□□□□□ -1.03
CDKL5-209ENST00000635828 RAD51CO43502 376 aa8.59□□□□□ -1.03
CDKL5-209ENST00000635828 ZNF500O60304 480 aaPredicted RBP8.59□□□□□ -1.03
CDKL5-209ENST00000635828 PHF2O75151 1096 aa8.59□□□□□ -1.03
CDKL5-209ENST00000635828 IGSF6O95976 241 aa8.59□□□□□ -1.03
CDKL5-209ENST00000635828 ITGAVP06756 1048 aa8.59□□□□□ -1.03
CDKL5-209ENST00000635828 TIMP2P16035 220 aa8.59□□□□□ -1.03
CDKL5-209ENST00000635828 CETN2P41208 172 aa8.59□□□□□ -1.03
CDKL5-209ENST00000635828 SLC20A2Q08357 652 aa8.59□□□□□ -1.03
CDKL5-209ENST00000635828 FGL2Q14314 439 aa8.59□□□□□ -1.03
CDKL5-209ENST00000635828 CYP1B1Q16678 543 aa8.59□□□□□ -1.03
CDKL5-209ENST00000635828 MAP7D1Q3KQU3 841 aa8.59□□□□□ -1.03
CDKL5-209ENST00000635828 HP1BP3Q5SSJ5 553 aaPredicted RBP8.59□□□□□ -1.03
CDKL5-209ENST00000635828 AGGF1Q8N302 714 aaeCLIP8.59□□□□□ -1.03
CDKL5-209ENST00000635828 LPCAT1Q8NF37 534 aa8.59□□□□□ -1.03
CDKL5-209ENST00000635828 OR14C36Q8NHC7 312 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms