RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 PSKH2Q96QS6 385 aa18.9■□□□□ 0.62
PNKP-224ENST00000631020 IL12RB2Q99665 862 aa18.9■□□□□ 0.62
PNKP-224ENST00000631020 AP1M1Q9BXS5 423 aa18.9■□□□□ 0.62
PNKP-224ENST00000631020 TM6SF2Q9BZW4 377 aa18.9■□□□□ 0.62
PNKP-224ENST00000631020 USP29Q9HBJ7 922 aa18.9■□□□□ 0.62
PNKP-224ENST00000631020 ATXN2Q99700 1313 aaKnown RBP18.89■□□□□ 0.61
PNKP-224ENST00000631020 EDDM13A0A1B0GTR0 161 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 TARSL2A2RTX5 802 aaKnown RBP18.89■□□□□ 0.61
PNKP-224ENST00000631020 PDE2AO00408 941 aaPredicted RBP18.89■□□□□ 0.61
PNKP-224ENST00000631020 MCF2LO15068 1137 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 JCHAINP01591 159 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 TUBB4AP04350 444 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 ENGP17813 658 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 RENBPP51606 427 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 IFI35P80217 286 aaPredicted RBP18.89■□□□□ 0.61
PNKP-224ENST00000631020 WASHC5Q12768 1159 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 SNX1Q13596 522 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 CCNG2Q16589 344 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 ATXN7L2Q5T6C5 722 aaPredicted RBP18.89■□□□□ 0.61
PNKP-224ENST00000631020 DARS2Q6PI48 645 aaKnown RBP18.89■□□□□ 0.61
PNKP-224ENST00000631020 PCDH20Q8N6Y1 951 aaKnown RBP18.89■□□□□ 0.61
PNKP-224ENST00000631020 MAIP1Q8WWC4 291 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 ZNF592Q92610 1267 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 FAM129BQ96TA1 746 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 CEP41Q9BYV8 373 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 RBM22Q9NW64 420 aaKnown RBP eCLIP18.89■□□□□ 0.614e-6■■■□□ 16.3
PNKP-224ENST00000631020 SEPT3Q9UH03 358 aa18.89■□□□□ 0.61
PNKP-224ENST00000631020 ASCC3Q8N3C0 2202 aaKnown RBP18.89■□□□□ 0.61
PNKP-224ENST00000631020 KIF2AO00139 706 aaPredicted RBP18.88■□□□□ 0.61
PNKP-224ENST00000631020 BNIP3LO60238 219 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 GJB3O75712 270 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 KCNK5O95279 499 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 CSRP1P21291 193 aaKnown RBP18.88■□□□□ 0.61
PNKP-224ENST00000631020 MMP13P45452 471 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 RHOAP61586 193 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 OASLQ15646 514 aaKnown RBP18.88■□□□□ 0.61
PNKP-224ENST00000631020 CARD16Q5EG05 197 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 DPY19L3Q6ZPD9 716 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 PLPP6Q8IY26 295 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 STK40Q8N2I9 435 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 DEFB119Q8N690 84 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 CHST14Q8NCH0 376 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 NSMCE1Q8WV22 266 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 HTR3CQ8WXA8 447 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 EXOC2Q96KP1 924 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 NSMCE3Q96MG7 304 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 CINPQ9BW66 212 aaPredicted RBP18.88■□□□□ 0.61
PNKP-224ENST00000631020 SEPT10Q9P0V9 454 aa18.88■□□□□ 0.61
PNKP-224ENST00000631020 TTC24A2A3L6 582 aaPredicted RBP18.87■□□□□ 0.61
PNKP-224ENST00000631020 RNF103O00237 685 aa18.87■□□□□ 0.61
PNKP-224ENST00000631020 CFIP05156 583 aa18.87■□□□□ 0.61
PNKP-224ENST00000631020 GNSP15586 552 aa18.87■□□□□ 0.61
PNKP-224ENST00000631020 PTPN3P26045 913 aa18.87■□□□□ 0.61
PNKP-224ENST00000631020 MAXP61244 160 aa18.87■□□□□ 0.61
PNKP-224ENST00000631020 CDKL3Q8IVW4 592 aaPredicted RBP18.87■□□□□ 0.61
PNKP-224ENST00000631020 OR2AP1Q8NGE2 309 aa18.87■□□□□ 0.61
PNKP-224ENST00000631020 NAP1L3Q99457 506 aaPredicted RBP18.87■□□□□ 0.61
PNKP-224ENST00000631020 TMEM121Q9BTD3 319 aa18.87■□□□□ 0.61
PNKP-224ENST00000631020 GPR174Q9BXC1 333 aa18.87■□□□□ 0.61
PNKP-224ENST00000631020 FRMD8P1Q9BZ68 369 aaPredicted RBP18.87■□□□□ 0.61
PNKP-224ENST00000631020 NT5MQ9NPB1 228 aa18.87■□□□□ 0.61
PNKP-224ENST00000631020 SCML1Q9UN30 329 aa18.87■□□□□ 0.61
PNKP-224ENST00000631020 ADAMTS9Q9P2N4 1935 aa18.87■□□□□ 0.61
PNKP-224ENST00000631020 METTL12A8MUP2 240 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 UPK3BL1B0FP48 263 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 UPK3BL2E5RIL1 263 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 INSIG1O15503 277 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 GSRP00390 522 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 HLA-DQB2P05538 268 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 SYPP08247 313 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 CR2P20023 1033 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 GKP32189 559 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 NSUN2Q08J23 767 aaKnown RBP eCLIP18.86■□□□□ 0.61
PNKP-224ENST00000631020 ZNF235Q14590 738 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 MYLK3Q32MK0 819 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 TEX44Q53QW1 395 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 DRICH1Q6PGQ1 229 aaPredicted RBP18.86■□□□□ 0.61
PNKP-224ENST00000631020 RGL4Q8IZJ4 473 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 OR6K2Q8NGY2 324 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 MGME1Q9BQP7 344 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 ATP8A1Q9Y2Q0 1164 aa18.86■□□□□ 0.61
PNKP-224ENST00000631020 TPRP12270 2363 aaKnown RBP18.86■□□□□ 0.61
PNKP-224ENST00000631020 KRIT1O00522 736 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 ARHGAP33O14559 1287 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 KCNN4O15554 427 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 CTSLP07711 333 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 CEACAM1P13688 526 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 KCNJ1P48048 391 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 CCNHP51946 323 aaPredicted RBP18.85■□□□□ 0.61
PNKP-224ENST00000631020 GDF10P55107 478 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 RPS14P62263 151 aaKnown RBP18.85■□□□□ 0.61
PNKP-224ENST00000631020 SNRPD1P62314 119 aaKnown RBP18.85■□□□□ 0.61
PNKP-224ENST00000631020 IHHQ14623 411 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 CYP1B1Q16678 543 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 FAM71DQ8N9W8 422 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 AGAP3Q96P47 875 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 ZDHHC5Q9C0B5 715 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 RSPH9Q9H1X1 276 aaPredicted RBP18.85■□□□□ 0.61
PNKP-224ENST00000631020 SARDHQ9UL12 918 aa18.85■□□□□ 0.61
PNKP-224ENST00000631020 WASF2Q9Y6W5 498 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms