RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ALPIP09923 528 aa20.42■□□□□ 0.86
TARDBP-228ENST00000629725 CCKBRP32239 447 aa20.42■□□□□ 0.86
TARDBP-228ENST00000629725 TRIM65Q6PJ69 517 aa20.42■□□□□ 0.86
TARDBP-228ENST00000629725 PCDH19Q8TAB3 1148 aa20.42■□□□□ 0.86
TARDBP-228ENST00000629725 CRACR2AQ9BSW2 395 aa20.42■□□□□ 0.86
TARDBP-228ENST00000629725 ZYG11BQ9C0D3 744 aa20.42■□□□□ 0.86
TARDBP-228ENST00000629725 TMEM51Q9NW97 253 aa20.42■□□□□ 0.86
TARDBP-228ENST00000629725 PCDHGA4Q9Y5G9 962 aa20.42■□□□□ 0.86
TARDBP-228ENST00000629725 CHD5Q8TDI0 1954 aa20.42■□□□□ 0.86
TARDBP-228ENST00000629725 A0A1W2PQM1 296 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 KRIT1O00522 736 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 UGT2B4P06133 528 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 CTSEP14091 401 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 KRT9P35527 623 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 HK3P52790 923 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 PTK2Q05397 1052 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 POLD3Q15054 466 aaPredicted RBP20.41■□□□□ 0.86
TARDBP-228ENST00000629725 SLC25A52Q3SY17 297 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 ARTNQ5T4W7 220 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 TTC7BQ86TV6 843 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 LURAP1LQ8IV03 231 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 DRC7Q8IY82 874 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 OR6C4Q8NGE1 309 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 HAPLN3Q96S86 360 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 TBCBQ99426 244 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 OSBPL1AQ9BXW6 950 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 LRRN3Q9H3W5 708 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 MBNL1Q9NR56 388 aaKnown RBP20.41■□□□□ 0.86
TARDBP-228ENST00000629725 MAN1B1Q9UKM7 699 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 CTNND2Q9UQB3 1225 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 LOXL2Q9Y4K0 774 aa20.41■□□□□ 0.86
TARDBP-228ENST00000629725 CXorf51AA0A1B0GTR3 108 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 GOLGA6L4A6NEF3 574 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 PPP1R3GB7ZBB8 358 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 AREL1O15033 823 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 MMP20O60882 483 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 LRP4O75096 1905 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 PPFIA2O75334 1257 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 TCEA2Q15560 299 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 TBR1Q16650 682 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 VASH2Q86V25 355 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 HID1Q8IV36 788 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 TP53I13Q8NBR0 393 aaPredicted RBP20.4■□□□□ 0.86
TARDBP-228ENST00000629725 OR2AP1Q8NGE2 309 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 CXorf40AQ8TE69 158 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 SHC3Q92529 594 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 KLHL32Q96NJ5 620 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 EPAS1Q99814 870 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 EDEM3Q9BZQ6 932 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 APEX2Q9UBZ4 518 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 GPR34Q9UPC5 381 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 PCDHB11Q9Y5F2 797 aa20.4■□□□□ 0.86
TARDBP-228ENST00000629725 PRAMEF33A0A0G2JMD5 474 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 PRAMEF10O60809 474 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 POP4O95707 220 aaKnown RBP20.39■□□□□ 0.85
TARDBP-228ENST00000629725 SLC9A1P19634 815 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 ITIH1P19827 911 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 ACVRL1P37023 503 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 PEX5P50542 639 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 GEMIN4P57678 1058 aaKnown RBP20.39■□□□□ 0.85
TARDBP-228ENST00000629725 SNRPD1P62314 119 aaKnown RBP20.39■□□□□ 0.85
TARDBP-228ENST00000629725 KLHL40Q2TBA0 621 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 LRRC73Q5JTD7 316 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 GKN2Q86XP6 184 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 TSACCQ96A04 125 aaPredicted RBP20.39■□□□□ 0.85
TARDBP-228ENST00000629725 TMEM159Q96B96 161 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 TIGD1Q96MW7 591 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 SLC25A18Q9H1K4 315 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 PLCB1Q9NQ66 1216 aa20.39■□□□□ 0.85
TARDBP-228ENST00000629725 PPARGC1AQ9UBK2 798 aaKnown RBP20.39■□□□□ 0.85
TARDBP-228ENST00000629725 NBPF19A0A087WUL8 3843 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 LRRK1Q38SD2 2015 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 GSRP00390 522 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 ETFBP38117 255 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 STX17P56962 302 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 CYP4F2P78329 520 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 APBA1Q02410 837 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 TLE1Q04724 770 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 MYLK3Q32MK0 819 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 RD3Q7Z3Z2 195 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 ARHGEF2Q92974 986 aaKnown RBP20.38■□□□□ 0.85
TARDBP-228ENST00000629725 VOPP1Q96AW1 172 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 SEPT3Q9UH03 358 aa20.38■□□□□ 0.85
TARDBP-228ENST00000629725 TMEM110-MUSTN1A8MSY1 372 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 AGRPO00253 132 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 RASGRP1O95267 797 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 NTRK1P04629 796 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 BMP6P22004 513 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 HTR1BP28222 390 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 IRF4Q15306 451 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 ALG11Q2TAA5 492 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 FAM102AQ5T9C2 384 aaPredicted RBP20.37■□□□□ 0.85
TARDBP-228ENST00000629725 ENPP7Q6UWV6 458 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 GDPD4Q6W3E5 623 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 SLC47A2Q86VL8 602 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 ZFAND4Q86XD8 727 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 CCNJLQ8IV13 435 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 Q8N9G6 341 aaPredicted RBP20.37■□□□□ 0.85
TARDBP-228ENST00000629725 CMKLR1Q99788 373 aa20.37■□□□□ 0.85
TARDBP-228ENST00000629725 WRAP53Q9BUR4 548 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms