RNA–Protein interactions for RNA: ENST00000628962.1

VPS8-228, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5 BASIC

Gene VPS8, Length 207 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-228ENST00000628962 SPARCP09486 303 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 CSH1P0DML2 217 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 CSH2P0DML3 217 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 FGF3P11487 239 aaPredicted RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 ACP5P13686 325 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 ALADP13716 330 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 CHN1P15882 459 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 MMP8P22894 467 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 NFKBIAP25963 317 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 MAPK4P31152 587 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 ARRB2P32121 409 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 CPA2P48052 419 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 CDH15P55291 814 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 NLRP5P59047 1200 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 TAS2R50P59544 299 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 RPL15P61313 204 aaKnown RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 CREB5Q02930 508 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 CFHR3Q02985 330 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 PTP4A2Q12974 167 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 ACVR2BQ13705 512 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 THOC5Q13769 683 aaKnown RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 NAA25Q14CX7 972 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 PLCB4Q15147 1175 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 PRICKLE4Q2TBC4 344 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 FAM90A2PQ658T7 463 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 DENND2CQ68D51 928 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 INO80CQ6PI98 192 aaPredicted RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 ZNF793Q6ZN11 406 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 IKBIPQ70UQ0 350 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 ZNF329Q86UD4 541 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 TAGAPQ8N103 731 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 CNTROBQ8N137 903 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 SRBD1Q8N5C6 995 aaKnown RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 CCDC191Q8NCU4 936 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 NPIPB3Q92617 1050 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 USP6NLQ92738 828 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 ATP2A3Q93084 1043 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 MIB2Q96AX9 1013 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 FAM120BQ96EK7 910 aaKnown RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 ZMAT2Q96NC0 199 aaKnown RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 YME1L1Q96TA2 773 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 BAG1Q99933 345 aaPredicted RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 MXD3Q9BW11 206 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 TXLNGYQ9BZA5 131 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 FTOQ9C0B1 505 aaKnown RBP eCLIP3.42□□□□□ -1.86
VPS8-228ENST00000628962 USP44Q9H0E7 712 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 ALDH8A1Q9H2A2 487 aaPredicted RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 RANBP17Q9H2T7 1088 aaKnown RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 TTYH1Q9H313 450 aaPredicted RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 PDE11AQ9HCR9 933 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 KCNK9Q9NPC2 374 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 TRIM36Q9NQ86 728 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 BEX4Q9NWD9 120 aaPredicted RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 SARDHQ9UL12 918 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 SLC12A4Q9UP95 1085 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 RCE1Q9Y256 329 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 LYVE1Q9Y5Y7 322 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 PSAT1Q9Y617 370 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 CDK13Q14004 1512 aaKnown RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 FGD6Q6ZV73 1430 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 KIF27Q86VH2 1401 aa3.42□□□□□ -1.86
VPS8-228ENST00000628962 XIRP1Q702N8 1843 aaKnown RBP3.42□□□□□ -1.86
VPS8-228ENST00000628962 SCAF11Q99590 1463 aaKnown RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 MLH3Q9UHC1 1453 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 ABCC1P33527 1531 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 A8MVJ9 347 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 ZNF814B7Z6K7 855 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 GRM8O00222 908 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 VILLO15195 856 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 NKX2-8O15522 239 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 DHX16O60231 1041 aaKnown RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 SYF2O95926 243 aaKnown RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 PEPDP12955 493 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 BSGP35613 385 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 PPARGP37231 505 aaPredicted RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 RGS2P41220 211 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 CTCFP49711 727 aaPredicted RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 ZBED6P86452 979 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 NEXNQ0ZGT2 675 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 MTAPQ13126 283 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 SLC14A1Q13336 389 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 BECN1Q14457 450 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 KCNJ12Q14500 433 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 AASDHQ4L235 1098 aaPredicted RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 EARS2Q5JPH6 523 aaKnown RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 KRT74Q7RTS7 529 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 SZRD1Q7Z422 152 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 NR2C2APQ86WQ0 139 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 C17orf53Q8N3J3 647 aaPredicted RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 TNIP2Q8NFZ5 429 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 RUFY2Q8WXA3 655 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 SH3KBP1Q96B97 665 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 ELP4Q96EB1 424 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 SAAL1Q96ER3 474 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 RNFT2Q96EX2 444 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 EDC3Q96F86 508 aaKnown RBP3.41□□□□□ -1.86
VPS8-228ENST00000628962 MASTLQ96GX5 879 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 WDYHV1Q96HA8 205 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 RADILQ96JH8 1075 aa3.41□□□□□ -1.86
VPS8-228ENST00000628962 FEM1CQ96JP0 617 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms