RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TADA1Q96BN2 335 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 NSMCE3Q96MG7 304 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 ZSWIM3Q96MP5 696 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 PPP1R2P1Q96PQ5 205 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 FCRL5Q96RD9 977 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 MAGEH1Q9H213 219 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 CASS4Q9NQ75 786 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 RBM22Q9NW64 420 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 BCCIPQ9P287 314 aaKnown RBP eCLIP9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 CFAP97Q9P2B7 532 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 ARHGAP26Q9UNA1 814 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 ZNF510Q9Y2H8 683 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 PIAS3Q9Y6X2 628 aa9.64□□□□□ -0.87
PDLIM5-223ENST00000627587 SHISA7A6NL88 538 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 LEFTY2O00292 366 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 PSMD3O43242 534 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 SPAG6O75602 509 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 PAPSS2O95340 614 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 CD160O95971 181 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 CPP00450 1065 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 RHOCP08134 193 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 TGM1P22735 817 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 ADRA1AP35348 466 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 AVPR1AP37288 418 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 NIPAL4Q0D2K0 466 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 GRM2Q14416 872 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 EMC10Q5UCC4 262 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 MARC1Q5VT66 337 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 DENND5AQ6IQ26 1287 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 TSSK4Q6SA08 328 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 UNC5AQ6ZN44 842 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 SETD3Q86TU7 594 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 SYNPOQ8N3V7 929 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 NETO1Q8TDF5 533 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 USP13Q92995 863 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 ALG14Q96F25 216 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 XPO6Q96QU8 1125 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 EBNA1BP2Q99848 306 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 DHRS4Q9BTZ2 278 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 ACE2Q9BYF1 805 aaPredicted RBP9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 ACSS3Q9H6R3 686 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 SMYD2Q9NRG4 433 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 LGALS13Q9UHV8 139 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 ADAM21Q9UKJ8 722 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 CLEC4EQ9ULY5 219 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 NOVA2Q9UNW9 492 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 AAR2Q9Y312 384 aaKnown RBP9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 OR51B4Q9Y5P0 310 aa9.63□□□□□ -0.87
PDLIM5-223ENST00000627587 EXOC1LA0A1B0GW35 172 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 ILVBLA1L0T0 632 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 TTC24A2A3L6 582 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 SOBPA7XYQ1 873 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 RGS16O15492 202 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 ANXA9O76027 345 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 CHRNB1P11230 501 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 MGAT1P26572 445 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 WEE1P30291 646 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 ETFBP38117 255 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 MAXP61244 160 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 STEAP4Q687X5 459 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 IL31Q6EBC2 164 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 TRMT10BQ6PF06 316 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 KDELC1Q6UW63 502 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 LONP2Q86WA8 852 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 CPXM2Q8N436 756 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 HJURPQ8NCD3 748 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 FAM76AQ8TAV0 307 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 ARRDC2Q8TBH0 407 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 FBF1Q8TES7 1133 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 TMA16Q96EY4 203 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 IMP4Q96G21 291 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 MRGPRX2Q96LB1 330 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 APOL2Q9BQE5 337 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 STMN4Q9H169 189 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 TASP1Q9H6P5 420 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 LRRC40Q9H9A6 602 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 NT5MQ9NPB1 228 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 SYBUQ9NX95 663 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 OBP2AQ9NY56 170 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 ZC3H7BQ9UGR2 993 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 ZMYM5Q9UJ78 669 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 MAD1L1Q9Y6D9 718 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 CEP250Q9BV73 2442 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 COL4A3Q01955 1670 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 SDR42E2A6NKP2 422 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 HEPACAM2A8MVW5 462 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 CXorf49A8MYA2 514 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 H0Y626 953 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 AP3B1O00203 1094 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 SLC30A4O14863 429 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 TBL1XO60907 577 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 ZMPSTE24O75844 475 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 CREB1P16220 341 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 MZF1P28698 734 aaPredicted RBP9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 HOXA6P31267 233 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 MMP13P45452 471 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 RGRP47804 291 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 GEMP55040 296 aa9.62□□□□□ -0.87
PDLIM5-223ENST00000627587 SESN2P58004 480 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms