RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 LZTR1Q8N653 840 aa10.97□□□□□ -0.65
SSBP4-215ENST00000625926 DENND6BQ8NEG7 585 aa10.97□□□□□ -0.65
SSBP4-215ENST00000625926 CXorf40AQ8TE69 158 aa10.97□□□□□ -0.65
SSBP4-215ENST00000625926 TSC1Q92574 1164 aa10.97□□□□□ -0.65
SSBP4-215ENST00000625926 EXOC2Q96KP1 924 aa10.97□□□□□ -0.65
SSBP4-215ENST00000625926 KLF6Q99612 283 aaPredicted RBP10.97□□□□□ -0.65
SSBP4-215ENST00000625926 SUV39H2Q9H5I1 410 aa10.97□□□□□ -0.65
SSBP4-215ENST00000625926 PDFQ9HBH1 243 aa10.97□□□□□ -0.65
SSBP4-215ENST00000625926 CWC15Q9P013 229 aaKnown RBP10.97□□□□□ -0.65
SSBP4-215ENST00000625926 LHX3Q9UBR4 397 aa10.97□□□□□ -0.65
SSBP4-215ENST00000625926 IPO11Q9UI26 975 aaKnown RBP10.97□□□□□ -0.65
SSBP4-215ENST00000625926 GGT7Q9UJ14 662 aa10.97□□□□□ -0.65
SSBP4-215ENST00000625926 ITM2BQ9Y287 266 aa10.97□□□□□ -0.65
SSBP4-215ENST00000625926 GON4LQ3T8J9 2241 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 A0A087X0T9 212 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 SPTY2D1-AS1A0A0U1RR47 76 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 NEMP2A6NFY4 417 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 SRRM3A6NNA2 597 aaPredicted RBP10.96□□□□□ -0.65
SSBP4-215ENST00000625926 H3BRJ5 948 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 DFFAO00273 331 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 TRIM38O00635 465 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 INSIG1O15503 277 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 SPINT1O43278 529 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 MMP20O60882 483 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 PIAS2O75928 621 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 TM7SF2O76062 418 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 CAPNS1P04632 268 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 FAM228BP0C875 321 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 ARL4AP40617 200 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 CSNK1DP48730 415 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 ACADVLP49748 655 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 HNRNPKP61978 463 aaKnown RBP eCLIP10.96□□□□□ -0.65
SSBP4-215ENST00000625926 IL10RBQ08334 325 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 ELP6Q0PNE2 266 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 FZD2Q14332 565 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 RFTN1Q14699 578 aaPredicted RBP10.96□□□□□ -0.65
SSBP4-215ENST00000625926 UGP2Q16851 508 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 CFAP58Q5T655 872 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 ARHGAP12Q8IWW6 846 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 CENPTQ96BT3 561 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 ZNF641Q96N77 438 aaPredicted RBP10.96□□□□□ -0.65
SSBP4-215ENST00000625926 TUBGCP5Q96RT8 1024 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 C1QTNF7Q9BXJ2 289 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 THAP2Q9H0W7 228 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 CCDC86Q9H6F5 360 aaKnown RBP10.96□□□□□ -0.65
SSBP4-215ENST00000625926 SP110Q9HB58 689 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 GPR27Q9NS67 375 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 UCKL1Q9NWZ5 548 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 DNAJC28Q9NX36 388 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 IP6K2Q9UHH9 426 aa10.96□□□□□ -0.65
SSBP4-215ENST00000625926 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.96□□□□□ -0.65
SSBP4-215ENST00000625926 CNOT1A5YKK6 2376 aaKnown RBP10.95□□□□□ -0.66
SSBP4-215ENST00000625926 TSPAN11A1L157 253 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 FAM149AA5PLN7 773 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 H3BM21 787 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 SIGLEC6O43699 453 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 BUB1BO60566 1050 aaPredicted RBP10.95□□□□□ -0.66
SSBP4-215ENST00000625926 PIGNO95427 931 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 CSF2P04141 144 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 GYPCP04921 128 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 CYP1A2P05177 515 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 RARAP10276 462 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 ALPPL2P10696 532 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 JUPP14923 745 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 ITIH2P19823 946 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 ACP1P24666 158 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 IL1R2P27930 398 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 CASP14P31944 242 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 HNF1BP35680 557 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 RENBPP51606 427 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 PFN3P60673 137 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 NSUN2Q08J23 767 aaKnown RBP eCLIP10.95□□□□□ -0.66
SSBP4-215ENST00000625926 DPYSQ14117 519 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 PDE1CQ14123 709 aaPredicted RBP10.95□□□□□ -0.66
SSBP4-215ENST00000625926 PTK2BQ14289 1009 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 DPYSL2Q16555 572 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 PROX2Q3B8N5 592 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 TMEM52BQ4KMG9 183 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 ZNF542PQ5EBM4 170 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 LRRC73Q5JTD7 316 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 CCDC122Q5T0U0 273 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 ERAP2Q6P179 960 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 ALKBH5Q6P6C2 394 aaKnown RBP10.95□□□□□ -0.66
SSBP4-215ENST00000625926 BRAT1Q6PJG6 821 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 SRLQ86TD4 932 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 PARGQ86W56 976 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 PROSER1Q86XN7 944 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 MARCH9Q86YJ5 346 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 CAMK1DQ8IU85 385 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 NPWQ8N729 165 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 NIPA2Q8N8Q9 360 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 TSEN2Q8NCE0 465 aaKnown RBP10.95□□□□□ -0.66
SSBP4-215ENST00000625926 OR4C6Q8NH72 309 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 HSPH1Q92598 858 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 WRAP53Q9BUR4 548 aaKnown RBP10.95□□□□□ -0.66
SSBP4-215ENST00000625926 NUP85Q9BW27 656 aa10.95□□□□□ -0.66
SSBP4-215ENST00000625926 CINPQ9BW66 212 aaPredicted RBP10.95□□□□□ -0.66
SSBP4-215ENST00000625926 TRABD2BA6NFA1 517 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 MYO1FO00160 1098 aa10.94□□□□□ -0.66
SSBP4-215ENST00000625926 TAF4O00268 1085 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms