RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 FAM129BQ96TA1 746 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 NCAPGQ9BPX3 1015 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 CEP41Q9BYV8 373 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 ZDHHC5Q9C0B5 715 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 NEUROG2Q9H2A3 272 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TSPY26PQ9H489 355 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 CATSPERBQ9H7T0 1116 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 MRPL47Q9HD33 250 aaKnown RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 DONSONQ9NYP3 566 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 IFNKQ9P0W0 207 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 MYO1AQ9UBC5 1043 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 CNOT8Q9UFF9 292 aaKnown RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 DNAI1Q9UI46 699 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 VPS51Q9UID3 782 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 FZD4Q9ULV1 537 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 TPX2Q9ULW0 747 aaKnown RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 SOX13Q9UN79 622 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 HS3ST2Q9Y278 367 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 OR51B4Q9Y5P0 310 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 SCINQ9Y6U3 715 aa6.53□□□□□ -1.36
TCF4-249ENST00000625716 RIF1Q5UIP0 2472 aaKnown RBP6.53□□□□□ -1.36
TCF4-249ENST00000625716 MYO15AQ9UKN7 3530 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 OTOGLQ3ZCN5 2332 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 EML5Q05BV3 1969 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 PRR19A6NJB7 356 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 KIAA1324LA8MWY0 1029 aaPredicted RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 I6L893 689 aaPredicted RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 PDE2AO00408 941 aaPredicted RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 KPNA3O00505 521 aaPredicted RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 CDX4O14627 284 aaPredicted RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 SLC7A4O43246 635 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 PRPSAP2O60256 369 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 SNAP91O60641 907 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 RAMP2O60895 175 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 LRIG2O94898 1065 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 KCNK5O95279 499 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 CER1O95813 267 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 MT-CO1P00395 513 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 PRNPP04156 253 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 SERPING1P05155 500 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 VAV1P15498 845 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 CSRP1P21291 193 aaKnown RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 CD27P26842 260 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 L1CAMP32004 1257 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 CHRNA3P32297 505 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 NOVA1P51513 510 aaKnown RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 GALCP54803 685 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 RPL7AP62424 266 aaKnown RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 RAD51Q06609 339 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 SCAPQ12770 1279 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 MAMLD1Q13495 774 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 POLD3Q15054 466 aaPredicted RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 RAB6CQ53S08 254 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 SLC45A4Q5BKX6 768 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 ERMARDQ5T6L9 678 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 PLEKHA7Q6IQ23 1121 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 NCEH1Q6PIU2 408 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 LINGO4Q6UY18 593 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 PRPF39Q86UA1 669 aaKnown RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 RYBPQ8N488 228 aaPredicted RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 MINDY1Q8N5J2 469 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 TMIEQ8NEW7 156 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 OR52K2Q8NGK3 314 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 FRS2Q8WU20 508 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 CCDC97Q96F63 343 aaPredicted RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 PPP1R16AQ96I34 528 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 PSMB7Q99436 277 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 ACE2Q9BYF1 805 aaPredicted RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 CEP44Q9C0F1 390 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 RAB6CQ9H0N0 254 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 MAGEH1Q9H213 219 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 CAPN10Q9HC96 672 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 FSCN3Q9NQT6 498 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 AASDHPPTQ9NRN7 309 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 TMEM248Q9NWD8 314 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 ZNHIT6Q9NWK9 470 aaKnown RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 TAS2R14Q9NYV8 317 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 IL36AQ9UHA7 158 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 ADAMTS1Q9UHI8 967 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 PPM1HQ9ULR3 514 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 FZD10Q9ULW2 581 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 CAPN11Q9UMQ6 739 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 EP300Q09472 2414 aaPredicted RBP6.52□□□□□ -1.37
TCF4-249ENST00000625716 GPR179Q6PRD1 2367 aa6.52□□□□□ -1.37
TCF4-249ENST00000625716 THADAQ6YHU6 1953 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 USP34Q70CQ2 3546 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 CXorf51AA0A1B0GTR3 108 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 A0A1W2PPC4 97 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 TCRBV5S1A1TA0A578 114 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 MED19A0JLT2 244 aaPredicted RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 TMEM191CA6NGB0 347 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 ZSCAN5CA6NGD5 496 aaPredicted RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 EIF3CLB5ME19 914 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 FAM72CH0Y354 149 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 K7ERQ8 282 aa6.51□□□□□ -1.37
TCF4-249ENST00000625716 EEF2KO00418 725 aaKnown RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 DDX3XO00571 662 aaKnown RBP eCLIP6.51□□□□□ -1.37
TCF4-249ENST00000625716 FGF10O15520 208 aaPredicted RBP6.51□□□□□ -1.37
TCF4-249ENST00000625716 SMAD6O43541 496 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms