RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 PAPOLAP51003 745 aaKnown RBP13.22□□□□□ -0.29
ATRX-208ENST00000622960 IL10RBQ08334 325 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 PDE1CQ14123 709 aaPredicted RBP13.22□□□□□ -0.29
ATRX-208ENST00000622960 KRT81Q14533 505 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 ZNF235Q14590 738 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 SHBQ15464 509 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 HADHQ16836 314 aaKnown RBP13.22□□□□□ -0.29
ATRX-208ENST00000622960 TMCO4Q5TGY1 634 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 BRAT1Q6PJG6 821 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 TMPRSS12Q86WS5 348 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 HCAR2Q8TDS4 363 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 BTN2A2Q8WVV5 523 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 ZNF641Q96N77 438 aaPredicted RBP13.22□□□□□ -0.29
ATRX-208ENST00000622960 LENG8Q96PV6 779 aaPredicted RBP13.22□□□□□ -0.29
ATRX-208ENST00000622960 PEBP4Q96S96 227 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 DUSP23Q9BVJ7 150 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 C1QTNF2Q9BXJ5 285 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 TMEM121BQ9BXQ6 578 aaPredicted RBP13.22□□□□□ -0.29
ATRX-208ENST00000622960 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.22□□□□□ -0.29
ATRX-208ENST00000622960 HAUS2Q9NVX0 235 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 NCKIPSDQ9NZQ3 722 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 LCMT1Q9UIC8 334 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 ITM2BQ9Y287 266 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 CEP295Q9C0D2 2601 aa13.22□□□□□ -0.29
ATRX-208ENST00000622960 MYO1FO00160 1098 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 RNF103O00237 685 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 TOR1BO14657 336 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 RIOK3O14730 519 aaKnown RBP13.21□□□□□ -0.29
ATRX-208ENST00000622960 DKK1O94907 266 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 JUPP14923 745 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 DGKAP23743 735 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 ACADVLP49748 655 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 DUSP3P51452 185 aaPredicted RBP13.21□□□□□ -0.29
ATRX-208ENST00000622960 POLR2LP62875 67 aaKnown RBP13.21□□□□□ -0.29
ATRX-208ENST00000622960 BCL2L1Q07817 233 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 DNAJC3Q13217 504 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 ZNF211Q13398 564 aaPredicted RBP13.21□□□□□ -0.29
ATRX-208ENST00000622960 SMAD1Q15797 465 aaKnown RBP13.21□□□□□ -0.29
ATRX-208ENST00000622960 CA9Q16790 459 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 SMTNL2Q2TAL5 461 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 LRRC73Q5JTD7 316 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 CCDC122Q5T0U0 273 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 ALKBH5Q6P6C2 394 aaKnown RBP13.21□□□□□ -0.29
ATRX-208ENST00000622960 ATPAF2Q8N5M1 289 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 OR4C6Q8NH72 309 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 ATL2Q8NHH9 583 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 CTNNBL1Q8WYA6 563 aaPredicted RBP13.21□□□□□ -0.29
ATRX-208ENST00000622960 NXPE2Q96DL1 559 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 ZNF599Q96NL3 588 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 WRAP53Q9BUR4 548 aaKnown RBP13.21□□□□□ -0.29
ATRX-208ENST00000622960 NUP85Q9BW27 656 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 SLC39A8Q9C0K1 460 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 KLC2Q9H0B6 622 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 THAP2Q9H0W7 228 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 SUV39H2Q9H5I1 410 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 NLGN3Q9NZ94 848 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 LHX3Q9UBR4 397 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 SEPT3Q9UH03 358 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 GGT7Q9UJ14 662 aa13.21□□□□□ -0.29
ATRX-208ENST00000622960 MAP1BP46821 2468 aaKnown RBP13.21□□□□□ -0.29
ATRX-208ENST00000622960 SPTY2D1-AS1A0A0U1RR47 76 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 POM121BA6NF01 834 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 J3KR12 359 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 AREL1O15033 823 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 LZTS3O60299 673 aaPredicted RBP13.2□□□□□ -0.3
ATRX-208ENST00000622960 PIAS2O75928 621 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 KRT37O76014 449 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 PIGNO95427 931 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 HTR1BP28222 390 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 CASP14P31944 242 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 HSPA9P38646 679 aaKnown RBP13.2□□□□□ -0.3
ATRX-208ENST00000622960 PBX1P40424 430 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 CSNK1DP48730 415 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 YPEL5P62699 121 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 E2F1Q01094 437 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 CYTH1Q15438 398 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 DPYSL2Q16555 572 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 ZFYVE27Q5T4F4 411 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 HGSNATQ68CP4 663 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 SRLQ86TD4 932 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 SLC22A18ASQ8N1D0 253 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 PDCD7Q8N8D1 485 aaKnown RBP13.2□□□□□ -0.3
ATRX-208ENST00000622960 TEKT4Q8WW24 435 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 GLMNQ92990 594 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 SLC13A1Q9BZW2 595 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 TRIM7Q9C029 511 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 PDFQ9HBH1 243 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 USP29Q9HBJ7 922 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 CTTNBP2NLQ9P2B4 639 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 TRPM6Q9BX84 2022 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 EPG5Q9HCE0 2579 aa13.2□□□□□ -0.3
ATRX-208ENST00000622960 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.19□□□□□ -0.3
ATRX-208ENST00000622960 A0A1W2PQ67 120 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 SIGLEC6O43699 453 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 MMP20O60882 483 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 NEBLO76041 1014 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 CSF2P04141 144 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 GYPCP04921 128 aa13.19□□□□□ -0.3
ATRX-208ENST00000622960 NME1P15531 152 aaKnown RBP13.19□□□□□ -0.3
ATRX-208ENST00000622960 JUNDP17535 347 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms