RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 MARC1Q5VT66 337 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 NXNQ6DKJ4 435 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 RNF111Q6ZNA4 994 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 SLC24A5Q71RS6 500 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 LDB1Q86U70 411 aaPredicted RBP12.08□□□□□ -0.48
TP53-227ENST00000622645 CIR1Q86X95 450 aaPredicted RBP12.08□□□□□ -0.48
TP53-227ENST00000622645 TXNDC5Q8NBS9 432 aaKnown RBP12.08□□□□□ -0.48
TP53-227ENST00000622645 IGSF8Q969P0 613 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 MARK4Q96L34 752 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 OLFM1Q99784 485 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 ZYG11BQ9C0D3 744 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 MRPL46Q9H2W6 279 aaKnown RBP12.08□□□□□ -0.48
TP53-227ENST00000622645 MRM3Q9HC36 420 aaKnown RBP12.08□□□□□ -0.48
TP53-227ENST00000622645 GPAMQ9HCL2 828 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 S100A14Q9HCY8 104 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 PRDM5Q9NQX1 630 aaPredicted RBP12.08□□□□□ -0.48
TP53-227ENST00000622645 POMPQ9Y244 141 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 SLC27A5Q9Y2P5 690 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 MYLKQ15746 1914 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 TMEM88BA6NKF7 163 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 WASH4PA8MWX3 477 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 LIN7AO14910 233 aaPredicted RBP12.08□□□□□ -0.48
TP53-227ENST00000622645 PIK3R1P27986 724 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 SERPINH1P50454 418 aaKnown RBP12.08□□□□□ -0.48
TP53-227ENST00000622645 NRG1Q02297 640 aaPredicted RBP12.08□□□□□ -0.48
TP53-227ENST00000622645 RAP1GAP2Q684P5 730 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 FBXL22Q6P050 247 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 IZUMO2Q6UXV1 221 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 PTAR1Q7Z6K3 402 aaPredicted RBP12.08□□□□□ -0.48
TP53-227ENST00000622645 LCA5Q86VQ0 697 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 SNX32Q86XE0 403 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 LRRC49Q8IUZ0 686 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 FBXO44Q9H4M3 255 aa12.08□□□□□ -0.48
TP53-227ENST00000622645 DPPA5A6NC42 116 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 A6NHS1 94 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 INPPL1O15357 1258 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 FKBP6O75344 327 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 TADA2AO75478 443 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 MMP2P08253 660 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 HNRNPLP14866 589 aaKnown RBP eCLIP12.07□□□□□ -0.48
TP53-227ENST00000622645 RHOQP17081 205 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 ETFBP38117 255 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 NUDT2P50583 147 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 SREBF2Q12772 1141 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 MSLNQ13421 630 aaPredicted RBP12.07□□□□□ -0.48
TP53-227ENST00000622645 NFE2Q16621 373 aaPredicted RBP12.07□□□□□ -0.48
TP53-227ENST00000622645 LRRC36Q1X8D7 754 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 EML3Q32P44 896 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 CAPRIN2Q6IMN6 1127 aaKnown RBP12.07□□□□□ -0.48
TP53-227ENST00000622645 MSANTD2Q6P1R3 559 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 RPS27LQ71UM5 84 aaKnown RBP12.07□□□□□ -0.48
TP53-227ENST00000622645 FBXW8Q8N3Y1 598 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 OR13J1Q8NGT2 312 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 C8orf48Q96LL4 319 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 CATSPER2Q96P56 530 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 PPP1R2P1Q96PQ5 205 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 RTKNQ9BST9 563 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 PRKD2Q9BZL6 878 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 SP110Q9HB58 689 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 ARNT2Q9HBZ2 717 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 CYP4F12Q9HCS2 524 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 IGSF5Q9NSI5 407 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 HEATR9A2RTY3 570 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 EOMESO95936 686 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 SLC2A3P11169 496 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 KCNA5P22460 613 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 PRDX6P30041 224 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 POLD2P49005 469 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 PRKAA2P54646 552 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 POU4F1Q01851 419 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 NSUN2Q08J23 767 aaKnown RBP eCLIP12.07□□□□□ -0.48
TP53-227ENST00000622645 ZRSR2Q15696 482 aaKnown RBP12.07□□□□□ -0.48
TP53-227ENST00000622645 CTXN3Q4LDR2 81 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 TMEM154Q6P9G4 183 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 TRIM67Q6ZTA4 783 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 ACAD11Q709F0 780 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 KDM1BQ8NB78 822 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 PCSK9Q8NBP7 692 aaKnown RBP12.07□□□□□ -0.48
TP53-227ENST00000622645 FUBP3Q96I24 572 aaKnown RBP eCLIP12.07□□□□□ -0.48
TP53-227ENST00000622645 MRPL57Q9BQC6 102 aaKnown RBP12.07□□□□□ -0.48
TP53-227ENST00000622645 POMKQ9H5K3 350 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 SUDS3Q9H7L9 328 aaPredicted RBP12.07□□□□□ -0.48
TP53-227ENST00000622645 ATP13A1Q9HD20 1204 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 CORO1CQ9ULV4 474 aaPredicted RBP12.07□□□□□ -0.48
TP53-227ENST00000622645 FIS1Q9Y3D6 152 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 KCTD3Q9Y597 815 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 PCDHB5Q9Y5E4 795 aa12.07□□□□□ -0.48
TP53-227ENST00000622645 PATJQ8NI35 1801 aa12.06□□□□□ -0.48
TP53-227ENST00000622645 RGSL1A5PLK6 1076 aa12.06□□□□□ -0.48
TP53-227ENST00000622645 OR51F1A6NGY5 319 aa12.06□□□□□ -0.48
TP53-227ENST00000622645 ARSDP51689 593 aa12.06□□□□□ -0.48
TP53-227ENST00000622645 NDST2P52849 883 aa12.06□□□□□ -0.48
TP53-227ENST00000622645 PLK1P53350 603 aa12.06□□□□□ -0.48
TP53-227ENST00000622645 ACLYP53396 1101 aa12.06□□□□□ -0.48
TP53-227ENST00000622645 MRPS35P82673 323 aaKnown RBP12.06□□□□□ -0.48
TP53-227ENST00000622645 ASPHQ12797 758 aa12.06□□□□□ -0.48
TP53-227ENST00000622645 SH2D4BQ5SQS7 431 aa12.06□□□□□ -0.48
TP53-227ENST00000622645 FAM171A1Q5VUB5 890 aa12.06□□□□□ -0.48
TP53-227ENST00000622645 TRAF7Q6Q0C0 670 aa12.06□□□□□ -0.48
TP53-227ENST00000622645 PGBD5Q8N414 524 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms