RNA–Protein interactions for RNA: ENST00000622277.4

SNX12-207, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 4 BASIC

Gene SNX12, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-207ENST00000622277 RAMP2O60895 175 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 H2AFYO75367 372 aaKnown RBP12.9□□□□□ -0.34
SNX12-207ENST00000622277 ESRRAP11474 423 aaPredicted RBP12.9□□□□□ -0.34
SNX12-207ENST00000622277 YBEYP58557 167 aaPredicted RBP12.9□□□□□ -0.34
SNX12-207ENST00000622277 MPP1Q00013 466 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 SERINC3Q13530 473 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 ITGA9Q13797 1035 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 SLC8B1Q6J4K2 584 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 EGFL6Q8IUX8 553 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 DTX3LQ8TDB6 740 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 PPP4R1Q8TF05 950 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 GIPC2Q8TF65 315 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 GATA6Q92908 595 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 MYEOVQ96EZ4 313 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 RPRD1AQ96P16 312 aaPredicted RBP12.9□□□□□ -0.34
SNX12-207ENST00000622277 KLHL5Q96PQ7 755 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 UNC93B1Q9H1C4 597 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 FAM96AQ9H5X1 160 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 NMRAL1Q9HBL8 299 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 MTRRQ9UBK8 725 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 PCDHB12Q9Y5F1 795 aa12.9□□□□□ -0.34
SNX12-207ENST00000622277 HEATR9A2RTY3 570 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 TMEM114B3SHH9 223 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 MAP3K7O43318 606 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 SERPINA6P08185 405 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 SLC35E2BP0CK96 405 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 COL6A2P12110 1019 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 TACR2P21452 398 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 DSC2Q02487 901 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 IHHQ14623 411 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 USP10Q14694 798 aaKnown RBP12.89□□□□□ -0.35
SNX12-207ENST00000622277 TBCCQ15814 346 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 CNGA3Q16281 694 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 PCSK7Q16549 785 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 FOXB2Q5VYV0 432 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 MFSD6LQ8IWD5 586 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 DENND6AQ8IWF6 608 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 TNS4Q8IZW8 715 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 PGBD5Q8N414 524 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 ARRDC2Q8TBH0 407 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 CDK5RAP1Q96SZ6 601 aaKnown RBP12.89□□□□□ -0.35
SNX12-207ENST00000622277 CCDC106Q9BWC9 280 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 ATXN3LQ9H3M9 355 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 DNAJC28Q9NX36 388 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 TLK1Q9UKI8 766 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 CDY1Q9Y6F8 540 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 HTTP42858 3142 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 ADAM12O43184 909 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 PAPSS2O95340 614 aaPredicted RBP12.89□□□□□ -0.35
SNX12-207ENST00000622277 CD86P42081 329 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 SLC1A2P43004 574 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 SERPINH1P50454 418 aaKnown RBP12.89□□□□□ -0.35
SNX12-207ENST00000622277 MAXP61244 160 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 SEPT6Q14141 434 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 POLD3Q15054 466 aaPredicted RBP12.89□□□□□ -0.35
SNX12-207ENST00000622277 TSTD2Q5T7W7 516 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 ZYG11AQ6WRX3 759 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 KIAA0408Q6ZU52 694 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 MAVSQ7Z434 540 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 CIR1Q86X95 450 aaPredicted RBP12.89□□□□□ -0.35
SNX12-207ENST00000622277 TREML1Q86YW5 311 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 SLC41A1Q8IVJ1 513 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 RNF168Q8IYW5 571 aaPredicted RBP12.89□□□□□ -0.35
SNX12-207ENST00000622277 ARHGAP24Q8N264 748 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 TMEM151AQ8N4L1 468 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 SLC25A41Q8N5S1 370 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 FBXO22Q8NEZ5 403 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 PABPC5Q96DU9 382 aaKnown RBP12.89□□□□□ -0.35
SNX12-207ENST00000622277 ZNF184Q99676 751 aaPredicted RBP12.89□□□□□ -0.35
SNX12-207ENST00000622277 LBHD1Q9BQE6 289 aaPredicted RBP12.89□□□□□ -0.35
SNX12-207ENST00000622277 EBF4Q9BQW3 602 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 ARMCX1Q9P291 453 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 SORCS3Q9UPU3 1222 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 BACE2Q9Y5Z0 518 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 CENPFP49454 3210 aa12.89□□□□□ -0.35
SNX12-207ENST00000622277 SCN5AQ14524 2016 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 ZNF195O14628 629 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 PRAMEF11O60813 436 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 TRIM13O60858 407 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 RAP1GDS1P52306 607 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 CTBP1Q13363 440 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 SLC12A1Q13621 1099 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 THOC5Q13769 683 aaKnown RBP12.88□□□□□ -0.35
SNX12-207ENST00000622277 GSTA3Q16772 222 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 RABGAP1LQ5R372 815 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 OVCA2Q8WZ82 227 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 SCLYQ96I15 445 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 PPP1R12CQ9BZL4 782 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 RETREG1Q9H6L5 497 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 PAK6Q9NQU5 681 aaPredicted RBP12.88□□□□□ -0.35
SNX12-207ENST00000622277 PNPOQ9NVS9 261 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.88□□□□□ -0.35
SNX12-207ENST00000622277 DNMT3LQ9UJW3 386 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 FBXO5Q9UKT4 447 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 TET1Q8NFU7 2136 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 FAM95CA0A1B0GW59 222 aa12.88□□□□□ -0.35
SNX12-207ENST00000622277 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.88□□□□□ -0.35
SNX12-207ENST00000622277 PHGDHO43175 533 aaKnown RBP12.88□□□□□ -0.35
SNX12-207ENST00000622277 PQBP1O60828 265 aaKnown RBP12.88□□□□□ -0.35
SNX12-207ENST00000622277 PARNO95453 639 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms