RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ARHGEF26Q96DR7 871 aa18.19■□□□□ 0.5
SCAMP4-213ENST00000621748 BMFQ96LC9 184 aa18.19■□□□□ 0.5
SCAMP4-213ENST00000621748 CCDC42Q96M95 316 aa18.19■□□□□ 0.5
SCAMP4-213ENST00000621748 C1QTNF2Q9BXJ5 285 aa18.19■□□□□ 0.5
SCAMP4-213ENST00000621748 CAAP1Q9H8G2 361 aa18.19■□□□□ 0.5
SCAMP4-213ENST00000621748 COL5A1P20908 1838 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-213ENST00000621748 ARHGAP42A6NI28 874 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 AREL1O15033 823 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 IPO7O95373 1038 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 CYP1A2P05177 515 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 TIMP2P16035 220 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 ITIH2P19823 946 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 RAD51Q06609 339 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 PIGHQ14442 188 aaPredicted RBP18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 BOLA3Q53S33 107 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 CCDC122Q5T0U0 273 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 TXNRD3NBQ6F5E7 133 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 ARHGAP36Q6ZRI8 547 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 TTC7BQ86TV6 843 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 PANX2Q96RD6 677 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 KLF6Q99612 283 aaPredicted RBP18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 DNAJC7Q99615 494 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 NUP85Q9BW27 656 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 CALN1Q9BXU9 219 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 CPEB1Q9BZB8 566 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 FTSJ1Q9UET6 329 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 NENFQ9UMX5 172 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 HS3ST3A1Q9Y663 406 aa18.18■□□□□ 0.5
SCAMP4-213ENST00000621748 POM121BA6NF01 834 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 DFFAO00273 331 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 NEMP1O14524 444 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 AKR1B10O60218 316 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 SDC3O75056 442 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 PIGNO95427 931 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 HNRNPH3P31942 346 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 ZNF135P52742 658 aaPredicted RBP18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 DPYSL2Q16555 572 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 Q6ZSR6 202 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 POLNQ7Z5Q5 900 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 SLC22A18ASQ8N1D0 253 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 NIPA2Q8N8Q9 360 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 TSEN2Q8NCE0 465 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 HSPH1Q92598 858 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 ZWILCHQ9H900 591 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 LUC7LQ9NQ29 371 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 KLHL11Q9NVR0 708 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 DKK3Q9UBP4 350 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 ANAPC7Q9UJX3 599 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 ANKRD36A6QL64 1941 aa18.17■□□□□ 0.5
SCAMP4-213ENST00000621748 LRRK1Q38SD2 2015 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 A6NNZ2 444 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 ENC1O14682 589 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 BUB1BO60566 1050 aaPredicted RBP18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 LDOC1O95751 146 aaPredicted RBP18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 RARAP10276 462 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 AMPD1P23109 780 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 EIF4A3P38919 411 aaKnown RBP18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 RGRP47804 291 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 SGCGQ13326 291 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 CCDC157Q569K6 752 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 KDM7AQ6ZMT4 941 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 SLC25A45Q8N413 288 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 KDF1Q8NAX2 398 aaPredicted RBP18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 CNDP2Q96KP4 475 aaKnown RBP18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 LENG8Q96PV6 779 aaPredicted RBP18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 GPR27Q9NS67 375 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 ETNK2Q9NVF9 386 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 IP6K2Q9UHH9 426 aa18.16■□□□□ 0.5
SCAMP4-213ENST00000621748 H3BRJ5 948 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 MMP20O60882 483 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 PALMO75781 387 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 KRT37O76014 449 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 CYLC1P35663 651 aaPredicted RBP18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 SLC25A11Q02978 314 aaKnown RBP18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 IL10RBQ08334 325 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 DNAJC3Q13217 504 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 KYAT3Q6YP21 454 aaKnown RBP18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 CCNI2Q6ZMN8 369 aaPredicted RBP18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 TMPRSS7Q7RTY8 843 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 PTAR1Q7Z6K3 402 aaPredicted RBP18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 ZSCAN30Q86W11 494 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 TMTC1Q8IUR5 882 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 TC2NQ8N9U0 490 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 ASB12Q8WXK4 309 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 CSPG4P5Q96PW8 444 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 SUV39H2Q9H5I1 410 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 SP110Q9HB58 689 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 UCKL1Q9NWZ5 548 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 IPO11Q9UI26 975 aaKnown RBP18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 DMXL2Q8TDJ6 3036 aa18.15■□□□□ 0.5
SCAMP4-213ENST00000621748 FREM2Q5SZK8 3169 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 MYO1FO00160 1098 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 DGKAP23743 735 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 ARL4AP40617 200 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 CSNK1DP48730 415 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 CCDC173Q0VFZ6 552 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 SPA17Q15506 151 aa18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 ASTE1Q2TB18 679 aaPredicted RBP18.14■□□□□ 0.49
SCAMP4-213ENST00000621748 ZNF542PQ5EBM4 170 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms